Transcript Information: S_Transcript_11345.p1


Annotated TAIR IDAT3G13570.1
Annotated Gene NameSC35-like splicing factor 30A
Annotated Gene Symbol(s)SCL30A, At-SCL30A
Annotation TypeOrtholog
Chromosome Positionchr3:4429564-4431602 | Reverse length=262
E-Value2.8E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7702549383814
Replicate 26.244185723825
Replicate 36.9595230504153
Condition 2: 8 Hour
Replicate 16.4378536806439
Replicate 28.3366794459359
Replicate 38.5464483321859
Condition 3: 24 Hour
Replicate 18.6555198736317
Replicate 28.2316674121639
Replicate 39.041864975419


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11345.p1 GENE.S_Transcript_11345~~S_Transcript_11345.p1 ORF type:internal len:212 (+),score=32.06,RRM_1|PF00076.18|2.8e-20,RRM_6|PF14259.2|7.8e-11,RRM_5|PF13893.2|5.5e-07 S_Transcript_11345:3-635(+)
GATCTATTCTTTCATTCCAACAATATTTTTTTTCCCTGTGCATCTGCGTGGCTGAAAACAAATACCATCTTGTTCGTTCTAGAGAGAGAAAGAGAGAGAGAGATTCCCTGTTTCTCGTTCTCCGTTTCAAGAAGGAAGATGAGGGGAAGAAGTTACAGCTACAGCCCTTCGCCACCAAGGGGTTATGGGAGAAGATACAGGAGCCCTTCTCCGAGGGGTCGTTATAGTCGTGGAAAGGAACCACCTACAAGTTTGTTGGTGCGGAACCTCCGTCATGATTGCAGGCCTGAAGATCTGCGAGGGCCATTTGGTCAGTTTGGTCCAATCAAAGACATTTACTTGCCAAGAGATTATTACACTGGAGAACCTCGTGGTTTTGGATTTGTGCAATTTGTGGACCCTGCTGATGCTGCTGATGCCAAGTATGAAATGGATGGTTATGTTCTTCTTGGTCGGGAATTGACTGTAGTGTTTGCAGAGGAGAACAGGAAAAAACCATCAGAAATGAGGGCAAGAGACCGAGTAAGGGGGCGGTCTTATGATCGCAGGCGTTCCCCTCTCCGTTATTCACGATCTCCACGATATGCAAGGACTTACTCACGTAGCCCTAGTTATTCACCTAGACGTGGTTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11345.p1 GENE.S_Transcript_11345~~S_Transcript_11345.p1 ORF type:internal len:212 (+),score=32.06,RRM_1|PF00076.18|2.8e-20,RRM_6|PF14259.2|7.8e-11,RRM_5|PF13893.2|5.5e-07 S_Transcript_11345:3-635(+)
DLFFHSNNIFFPCASAWLKTNTILFVLEREREREIPCFSFSVSRRKMRGRSYSYSPSPPRGYGRRYRSPSPRGRYSRGKEPPTSLLVRNLRHDCRPEDLRGPFGQFGPIKDIYLPRDYYTGEPRGFGFVQFVDPADAADAKYEMDGYVLLGRELTVVFAEENRKKPSEMRARDRVRGRSYDRRRSPLRYSRSPRYARTYSRSPSYSPRRGY

Click here to download the sequence:
Link to NCBI Protein BLAST