Transcript Information: S_Transcript_113550.p1


Annotated TAIR IDAT5G09530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2960080-2961192 | Reverse length=370
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6556320377995
Replicate 21.5759135398225
Replicate 30.10133371474506
Condition 2: 8 Hour
Replicate 10
Replicate 20.86045571691256
Replicate 30.70272025071367
Condition 3: 24 Hour
Replicate 10.48010732946361
Replicate 20
Replicate 30.13858266156657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113550.p1 GENE.S_Transcript_113550~~S_Transcript_113550.p1 ORF type:5prime_partial len:182 (+),score=37.90 S_Transcript_113550:1-546(+)
ACAATCCCGGAGCTACCCAAGCCCGATGTGCCCGAGATTCCAAAGCCTGAGATACCAAAACTACCAGAATTGCCTAAGCCCACAGTTCCTGAAGTACCAAAGCCCGAGATGCCAAAATTGCCTGAACTCCCAAAGCCCACTATGCACGAGGTACCAAAGCCTGAGATGCCAAAAATGCCTGAACTCCCTAAGCCCATAATTCCTGAAGTACCAAAGTCCGAGATGCCAAAAATGCCTGAACTCCCAAAGCCCACAGTGCATGAGGTTCCAAAGCCTGAGATCCCAAAAATGCCTGAACTTCCTAAGCCTACAGTTCCTAAAGTACCAAAGTCCGAGATGCCAAAATTGTCGGAACTCCCAAAGCCCACGGTGTCTGAGGTTCCAAAGCCTGAGATGCCCAAAATGCCTGAACTCCCTAAGCCCACAGTGCCAGAAGTGCCTAAGCCCGAGATGCCAAAAATGCATGAACTCCCTAAGCCTACAGTGCCAGAAGTTCCAAAGCCTGAGATGCCAAAGTTACCCGAACTCAGTGCCAGAAGTGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113550.p1 GENE.S_Transcript_113550~~S_Transcript_113550.p1 ORF type:5prime_partial len:182 (+),score=37.90 S_Transcript_113550:1-546(+)
TIPELPKPDVPEIPKPEIPKLPELPKPTVPEVPKPEMPKLPELPKPTMHEVPKPEMPKMPELPKPIIPEVPKSEMPKMPELPKPTVHEVPKPEIPKMPELPKPTVPKVPKSEMPKLSELPKPTVSEVPKPEMPKMPELPKPTVPEVPKPEMPKMHELPKPTVPEVPKPEMPKLPELSARSA*

Click here to download the sequence:
Link to NCBI Protein BLAST