Transcript Information: S_Transcript_113572.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value6E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0817486557025
Replicate 23.1131543547413
Replicate 32.3760580230406
Condition 2: 8 Hour
Replicate 11.962459231638
Replicate 24.529269970006
Replicate 34.446250420671
Condition 3: 24 Hour
Replicate 12.8143714926532
Replicate 23.1979611426748
Replicate 32.4757834998887


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113572.p1 GENE.S_Transcript_113572~~S_Transcript_113572.p1 ORF type:complete len:163 (+),score=35.99,Skp1|PF01466.15|5.4e+03,Skp1|PF01466.15|2.2e-29,Skp1_POZ|PF03931.11|2.6e-20 S_Transcript_113572:220-708(+)
ATGGCGTCGTCAAAGAAGATAACACTGCAGTGTTCAGATAACGAGACGTTCGAGGTTGACGAAGTGGTGGCGTTAGAGTCGAAAACCTTAAGGCATCTGATTGAGGACAGGCGTGCTGAGAGCATCATCCCTTTGCCGAATGTTTCGAGCAAGATCCTTGCGATAGTAATCGAGTTCTGCAATATGCGTTCTCAATTTCCTGAGCCTCCTGATGATGATATTTTCTCTGAAGTACTTCCTGTAGATGATGCACTCAAGAAGTTTGAAGCTGACTTCATCAGTGGTGAACAGGCCATTCTCTTAGATCTCATTCTTGCTGCCAACTATCTGGACATTAAGGGCCTGTTGAACTTGGCTTGCAAAAAAGTGTCTCGCATGATCATAGGAAAGACAGGGGAGGAGATAAGAAATATGTTCAAGATCGAGAATGGGCTTACAGCTGATGAAATGGAAGAGGCCCGTAGGGAGAACAAGTGGACATTCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113572.p1 GENE.S_Transcript_113572~~S_Transcript_113572.p1 ORF type:complete len:163 (+),score=35.99,Skp1|PF01466.15|5.4e+03,Skp1|PF01466.15|2.2e-29,Skp1_POZ|PF03931.11|2.6e-20 S_Transcript_113572:220-708(+)
MASSKKITLQCSDNETFEVDEVVALESKTLRHLIEDRRAESIIPLPNVSSKILAIVIEFCNMRSQFPEPPDDDIFSEVLPVDDALKKFEADFISGEQAILLDLILAANYLDIKGLLNLACKKVSRMIIGKTGEEIRNMFKIENGLTADEMEEARRENKWTFR*

Click here to download the sequence:
Link to NCBI Protein BLAST