Transcript Information: S_Transcript_113857.p1


Annotated TAIR IDAT3G59570.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22001030-22005402 | Reverse length=720
E-Value1.4E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0770759468037
Replicate 23.2685614159281
Replicate 33.7258052694143
Condition 2: 8 Hour
Replicate 14.4158636515275
Replicate 25.0468480096353
Replicate 34.6291992273444
Condition 3: 24 Hour
Replicate 14.1189005908191
Replicate 23.8917656242213
Replicate 34.0338286506499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113857.p1 GENE.S_Transcript_113857~~S_Transcript_113857.p1 ORF type:3prime_partial len:594 (+),score=109.46,RabGAP-TBC|PF00566.14|27,RabGAP-TBC|PF00566.14|1.5e-31 S_Transcript_113857:232-2010(+)
ATGTCTGTTGATTGTCTTGACAAGCAATGGGGTTGCGGAAAGCCGAGTGCTGTGAATTTGCAGAGAGTGGGTTCTATGGTTTGCGACATAGGAGACCCTTGTCTTCATCAATCGCCTATAAAGGTTGCGATGACTGTCAACAAAATGCTTAAGCAAGATAAGTGGCAGACAATTTTTGATAGTGATGGGAAGGTTCTAGGCTTTCAGAAAGCACTGAAGTTGATTACTCTGGGGGGTGTGGATCCATCGATAAGGTCGGAAGTATGGGAATTTCTTCTTGGTTGTTATGCATTGAGCAGTACCTCAGAGTACCGTAAACTGCTGAGAGCAGCCCGGAGGGAACGTTATGAAGAACTAGTGAGACAGTGTCAAAAAATGCATTCTAGCATAGGAACAGGTTCACTTGCTTATGTTGTTGGCTCTAAAATTATGGATGTCCGGACATATTCTAAAGATGATGCAAGAAGGGAGACTGATGGTGAAGGAAGGCAAGCTTCTGAGGATAATACTAACAAACTTAATGATTACTGTGATAGGAATAATAATTGTACAGATACAACATACACATGCCAAAGGGAAAGCTCTAGTGATTCTTCTGATATTGTCAGTGTAAGAGAAAGCATTGACAGTGCTGCTTATGATTCATCTTCTCTTATGCCTAGCCCTGCCAAATCCAATTGTAATTCCTTGAAAGCAAGGAAGCAAGCACGAGTATCTCAATATCCAGTCAGTAATTATTTAGATTTTCCTGCCTTGCCTGTAACGGATTTGTTTGAGAAGATTGATGAAGGTGAGCAAGGAAGTGAATCAAATGGTGATGAACATTCTACCCGATTGAAATTGAGACCTGACAAAGTGCGCATGCACAGTTTTCAAATTGATAATAATGAAGAATTAATTAACGAATCAAATGGTTCGCCATCTGAGAGTGTCAGATATTCTGTCAGTTCTGAAATTGAGATGGCTGATGACAAATGTCACCAACCCCGTGAATCAGTGTCACGACCTGATATTATAAAGTACAAAAATAAAGTGCTCAACAGATTGAGAATATCTGATGTGCCAGAAACCGCTGAGTTGTATTCAAGCAATTGTCAAGGAGGTGGACCTAGTGAAGATAAAGTATCTGAATGGCTCTGGACTCTGCATCGCATAGTTGTTGATGTGGTTAGAACGGATACTCATTTAGAGTTCTATGAAGATCCAAAAAATTTGGCGAGGATGTCAGATATTCTTGCCGTTTATGCATGGGTTGATCCTGAAACAGGATACTGCCAAGGTATGAGTGACCTGCTGTCTCCTTTTGTTGTTCTCTTTGAGAATGATGCTGATGCGTTTTGGTGCTTTGAGATGCTTCTTCGAAGAACGCGAGAAAACTTCCGGATGGAAGGACAGACCGGAGTAATGAAGCAGCTGCAAACACGTTGGCATATATTAAAACTCACAGACAGGGAAATGTTTTCACACCTATCCCACATAGGTGCTGAAAGCCTTCACTTTGCCTTCCGGATGCTGCTGGTACTCTTTCGCAGGGAATTATCATTTAGCGAAGCCCTTTGTATGTGGGAGATGATGTGGGCTGCTGATTTCGATGAATCCTTGGCTTTGAATCTAGCTCAAAATTGTTTAGAACCGTTAGTGCTGCAATTTCCAAATGAGTTAGGCACTGATGCTGGAGAAGAAAGTAAGGAGGCAGATGACTCCAGCTCAAAGGATGGCTCACAATCAAAACATGCAAATCTTGATCACGCAAGCTCCGATGAGGCTGTTATGAAATCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113857.p1 GENE.S_Transcript_113857~~S_Transcript_113857.p1 ORF type:3prime_partial len:594 (+),score=109.46,RabGAP-TBC|PF00566.14|27,RabGAP-TBC|PF00566.14|1.5e-31 S_Transcript_113857:232-2010(+)
MSVDCLDKQWGCGKPSAVNLQRVGSMVCDIGDPCLHQSPIKVAMTVNKMLKQDKWQTIFDSDGKVLGFQKALKLITLGGVDPSIRSEVWEFLLGCYALSSTSEYRKLLRAARRERYEELVRQCQKMHSSIGTGSLAYVVGSKIMDVRTYSKDDARRETDGEGRQASEDNTNKLNDYCDRNNNCTDTTYTCQRESSSDSSDIVSVRESIDSAAYDSSSLMPSPAKSNCNSLKARKQARVSQYPVSNYLDFPALPVTDLFEKIDEGEQGSESNGDEHSTRLKLRPDKVRMHSFQIDNNEELINESNGSPSESVRYSVSSEIEMADDKCHQPRESVSRPDIIKYKNKVLNRLRISDVPETAELYSSNCQGGGPSEDKVSEWLWTLHRIVVDVVRTDTHLEFYEDPKNLARMSDILAVYAWVDPETGYCQGMSDLLSPFVVLFENDADAFWCFEMLLRRTRENFRMEGQTGVMKQLQTRWHILKLTDREMFSHLSHIGAESLHFAFRMLLVLFRRELSFSEALCMWEMMWAADFDESLALNLAQNCLEPLVLQFPNELGTDAGEESKEADDSSSKDGSQSKHANLDHASSDEAVMKS

Click here to download the sequence:
Link to NCBI Protein BLAST