Transcript Information: S_Transcript_113859.p1


Annotated TAIR IDAT5G05010.1
Annotated Gene Nameclathrin adaptor complexes medium subunit family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1477137-1479872 | Forward length=527
E-Value8.3E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1329517417177
Replicate 26.0862867744868
Replicate 35.0298371137092
Condition 2: 8 Hour
Replicate 18.2894934148103
Replicate 26.3468724197343
Replicate 36.8491359859266
Condition 3: 24 Hour
Replicate 15.6495388337744
Replicate 25.8613305800898
Replicate 36.7601404283305


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113859.p1 GENE.S_Transcript_113859~~S_Transcript_113859.p1 ORF type:3prime_partial len:638 (+),score=115.67,RabGAP-TBC|PF00566.14|1.7e-31 S_Transcript_113859:1336-3246(+)
ATGCATTCTAGCATAGGAACAGGTTCACTTGCTTATGTTGTTGGCTCTAAAATTATGGATGTCCGGACATATTCTAAAGATGATGCAAGAAGGGAGACTGATGGTGAAGGAAGGCAAGCTTCTGAGGATAATACTAACAAACTTAATGATTACTGTGATAGGAATAATAATTGTACAGATACAACATACACATGCCAAAGGGAAAGCTCTAGTGATTCTTCTGATATTGTCAGTGTAAGAGAAAGCATTGACAGTGCTGCTTATGATTCATCTTCTCTTATGCCTAGCCCTGCCAAATCCAATTGTAATTCCTTGAAAGCAAGGAAGCAAGCACGAGTATCTCAATATCCAGTCAGTAATTATTTAGATTTTCCTGCCTTGCCTGTAACGGATTTGTTTGAGAAGATTGATGAAGGTGAGCAAGGAAGTGAATCAAATGGTGATGAACATACTACCCGATTAAAATTGAGACTTGAAAAAGTGCGCATGCACAGTTTTCAAATTGATAATAATGAAGAATTAATTAACGAATCAAATGGTTCGCCATCTGAGAGTGTCAGATATTCTGTCAGTTCTGAAATTGAGATGGCTGATGACAAATGTCACCAACCCCGTGAATCAGTGTCACGACCTGATATTATAAAGTACAAAAATAAAGTGCTCAACAGATTGAGAATATCTGATGTGCCAGAAACCGCTGAGTTGTATTCAAGCAATTGTCAAGGAGGTGGACCTAGTGAAGATAAAGTATCTGAATGGCTCTGGACTCTGCATCGCATAGTTGTTGATGTGGTTAGAACGGATACTCATTTAGAGTTCTATGAAGATCCAAAAAATTTGGCGAGGATGTCAGATATTCTTGCCGTTTATGCATGGGTTGATCCTGAAACAGGATACTGCCAAGGTATGAGTGACCTGCTGTCTCCTTTTGTTGTTCTCTTTGAGAATGATGCTGATGCGTTTTGGTGCTTTGAGATGCTTCTTCGAAGAACGCGAGAAAACTTCCGGATGGAAGGACAGACCGGAGTAATGAAGCAGCTGCAAACACGTTGGCATATATTAAAACTCACAGACAGGGAAATGTTTTCACACCTATCCCACATAGGTGCTGAAAGCCTTCACTTTGCCTTCCGGATGCTGCTGGTACTCTTTCGCAGGGAATTATCATTTAGCGAAGCCCTTTGTATGTGGGAGATGATGTGGGCTGCTGATTTCGATGAATCCTTGGCTTTGAATCTAGCTCAAAATTGTTTAGAACCGTTAGTGCTGCAATTTCCAAATGAGTTAGGCACTGATGCTGGAGAAGAAAGTAAGGAGGCAGATGACTCCAGCTCAAAGGATGGCTCACAATCAAAACATGCAAATCTTGATCACGCAAGCTCCGATGAGGCTGTTATGAAATCACTAACATCTAACCATTCATTTTGTGGCCTTACAAAGACCCTTTGGTCACGGAATGATCGCATGCATTCACGTACTGGTTTCTCAGCATCAAGGAATGGGGAAGATGAACTGCCTATTTTTTGTGTGGCTGCTATTCTAATCTTGAACCGTCACAAGATCATCAAAGAAACCCATTCAATTGATGATCTAATAAAGATATTCAATGATAATTTGCTGAAAATCAAAGTCAAAAGATGCATACGAACAGCAATCAAGCTCCGGAGAAAGTATTTTTACAAGGTTGTTCTTGCAGCTTCTATAATAAGCAAATCTGGAAAAGTGCTTGTCTCACGCCAGTTTGTGAACATGTCCCGTATAAGAATCGAGGGATTGCTTGCAGCTTTCCCTAAGCTGGTTGGAACAGGAAAGCAGCATACTTATGTTGAGACTGAAAATGTCCGCTATGTTTACCAGCCAATAGAAGTTCTTTACTTGATTCTTGTGACAAGCAAGCAGAGTAACATTTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113859.p1 GENE.S_Transcript_113859~~S_Transcript_113859.p1 ORF type:3prime_partial len:638 (+),score=115.67,RabGAP-TBC|PF00566.14|1.7e-31 S_Transcript_113859:1336-3246(+)
MHSSIGTGSLAYVVGSKIMDVRTYSKDDARRETDGEGRQASEDNTNKLNDYCDRNNNCTDTTYTCQRESSSDSSDIVSVRESIDSAAYDSSSLMPSPAKSNCNSLKARKQARVSQYPVSNYLDFPALPVTDLFEKIDEGEQGSESNGDEHTTRLKLRLEKVRMHSFQIDNNEELINESNGSPSESVRYSVSSEIEMADDKCHQPRESVSRPDIIKYKNKVLNRLRISDVPETAELYSSNCQGGGPSEDKVSEWLWTLHRIVVDVVRTDTHLEFYEDPKNLARMSDILAVYAWVDPETGYCQGMSDLLSPFVVLFENDADAFWCFEMLLRRTRENFRMEGQTGVMKQLQTRWHILKLTDREMFSHLSHIGAESLHFAFRMLLVLFRRELSFSEALCMWEMMWAADFDESLALNLAQNCLEPLVLQFPNELGTDAGEESKEADDSSSKDGSQSKHANLDHASSDEAVMKSLTSNHSFCGLTKTLWSRNDRMHSRTGFSASRNGEDELPIFCVAAILILNRHKIIKETHSIDDLIKIFNDNLLKIKVKRCIRTAIKLRRKYFYKVVLAASIISKSGKVLVSRQFVNMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQPIEVLYLILVTSKQSNIL

Click here to download the sequence:
Link to NCBI Protein BLAST