Transcript Information: S_Transcript_113902.p1


Annotated TAIR IDAT4G23330.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12192136-12194745 | Forward length=270
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.541966902457
Replicate 239.464426391611
Replicate 335.326931089714
Condition 2: 8 Hour
Replicate 146.555429565572
Replicate 250.257885324456
Replicate 351.037944969674
Condition 3: 24 Hour
Replicate 145.535813473351
Replicate 240.6990982533
Replicate 346.536448127749


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113902.p1 GENE.S_Transcript_113902~~S_Transcript_113902.p1 ORF type:complete len:142 (-),score=35.36,DUF2365|PF10157.5|4.7e-10 S_Transcript_113902:121-546(-)
ATGGATGGTGATGAGGATGGGAAAGAGCAAGGTTCAATGGAGAAGCCATCAAAGATGAAAGAACCCATTGATCGAGACTCCAATTCCTTCAACCAAGCTGATCTCTTGAAAGCCTTGGAGGTGGTAGAGAGAGACTCCCTCGCTATTGCCGACAGCTACACCTCCCTCTTCGCTTCTCTCCGATTAGCTCTCTCCCAGGTTACTAGCACTTCTGTTGATCATATCCAATGCTTCAGCGATGCGGCCGGCAACCTTCAAGAATCCGCTGTTGATGCAGCAATGAGAGGGAATCGTTTTATACATTCATGTATTAGGCTAAATGAGGAAATGAAGGGCATTGATGGATTAGCTTCACAATTAAAGGTTCTCAGGAGAAATGTGGATGCTTTGGACTCAGCAGTCACCCGACTCCTCCGAATCCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113902.p1 GENE.S_Transcript_113902~~S_Transcript_113902.p1 ORF type:complete len:142 (-),score=35.36,DUF2365|PF10157.5|4.7e-10 S_Transcript_113902:121-546(-)
MDGDEDGKEQGSMEKPSKMKEPIDRDSNSFNQADLLKALEVVERDSLAIADSYTSLFASLRLALSQVTSTSVDHIQCFSDAAGNLQESAVDAAMRGNRFIHSCIRLNEEMKGIDGLASQLKVLRRNVDALDSAVTRLLRIP*

Click here to download the sequence:
Link to NCBI Protein BLAST