Transcript Information: S_Transcript_113907.p1


Annotated TAIR IDAT4G23330.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12192136-12194745 | Forward length=270
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1604169525881
Replicate 25.3114123008832
Replicate 310.075198416041
Condition 2: 8 Hour
Replicate 18.2932073455517
Replicate 27.8715763732371
Replicate 310.460554843185
Condition 3: 24 Hour
Replicate 110.113371986386
Replicate 29.6531049306665
Replicate 38.6408855832342


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113907.p1 GENE.S_Transcript_113907~~S_Transcript_113907.p1 ORF type:5prime_partial len:108 (+),score=18.17 S_Transcript_113907:1-324(+)
TTGAAAGCATCAAACATGGATGGTGATGAGGATGGGAAAGAGCAAGCTTCAATGGAGAACCCATCAAAGATGAAAGAACCCATTGATCCAGACTCCACCTCCTTCAACCAAGCCGACCTCTTGAAAGCCTTGGAGGTGGTAGAGAGAGACTCCCTCGCTATTGCCGACAGCTACACCTCCCTCTTCGCTTCTCTCCGATTAGCTCTCTCCCAGGTTAACCTATTCTTTTTACTCTTGTTTTTAACTTATTGTCCGATTCATTACTGGGTATCATTTTTTGTTTTTGATTGTTTTTTGGGGGGTAGTTCTACATTGGGGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113907.p1 GENE.S_Transcript_113907~~S_Transcript_113907.p1 ORF type:5prime_partial len:108 (+),score=18.17 S_Transcript_113907:1-324(+)
LKASNMDGDEDGKEQASMENPSKMKEPIDPDSTSFNQADLLKALEVVERDSLAIADSYTSLFASLRLALSQVNLFFLLLFLTYCPIHYWVSFFVFDCFLGGSSTLGF*

Click here to download the sequence:
Link to NCBI Protein BLAST