Transcript Information: S_Transcript_11392.p1


Annotated TAIR IDAT2G15270.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6637967-6639252 | Forward length=194
E-Value4.8E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.480973300807
Replicate 218.91096247787
Replicate 318.867683919628
Condition 2: 8 Hour
Replicate 121.325390317133
Replicate 220.413023182792
Replicate 318.761875080882
Condition 3: 24 Hour
Replicate 117.415506192962
Replicate 219.217241152295
Replicate 315.226211138572


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11392.p1 GENE.S_Transcript_11392~~S_Transcript_11392.p1 ORF type:5prime_partial len:217 (+),score=26.99,DUF1168|PF06658.8|1.6e-26 S_Transcript_11392:3-653(+)
CAATTTCTCCAATCCCTAAGACCGACGATACTCCTTTCAATTAGTCTGTGGAATTTTTTTTTTTTTTTGTTTTTTTTTTTGGAAAAACACAGAAGAATGTCGTCGGGGCAAGCGAAGGCAGTAATGGAATGCGATTTACAGATAGTTCCGGTCAACGACAAGCCGGTTACGACGCTCTCTTTGCCCCCGAAACCACCCACAAGCGACGGTTCTTCGAACAACGCGCTCGTAGAGTACACAGGTCGCCCTGTATTCAGGGAAGAAGAAGAGGACTTGGAGATTAAACTACGTCGTATTATCGACAATGTTCCTGTTCGCGTCAGCAATACGTCAGGTAGTTCCGCTGGTTCTGGCTCCGGTGACTTCCACCAGTATCGGCAAATGAGACGAAAAGAGCAAGACAGGCTTGCAAGAATGGAGGCAGATTATCAGAGGAGGAAAGAGATTGCGGAATTCGAAATAAGAAGAGATCAAAGGCTGAAAGCTGCTGAAGAACATACTGCTAAAAAGCGTTTGAAACGTCAGAAGAAGAAACAGAGAAAAAAGGAGAAGAAAAGCAAACTGACTACAGCAGGCGGCGGAAGTATCAAAGCTGAATCATCTGATGACAGTGAAGATTCTGATAATGGTGACCAAGCAGGTGGCCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11392.p1 GENE.S_Transcript_11392~~S_Transcript_11392.p1 ORF type:5prime_partial len:217 (+),score=26.99,DUF1168|PF06658.8|1.6e-26 S_Transcript_11392:3-653(+)
QFLQSLRPTILLSISLWNFFFFLFFFLEKHRRMSSGQAKAVMECDLQIVPVNDKPVTTLSLPPKPPTSDGSSNNALVEYTGRPVFREEEEDLEIKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEADYQRRKEIAEFEIRRDQRLKAAEEHTAKKRLKRQKKKQRKKEKKSKLTTAGGGSIKAESSDDSEDSDNGDQAGGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST