Transcript Information: S_Transcript_113953.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value1E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1734866686379
Replicate 21.1465701659811
Replicate 30.95844140276979
Condition 2: 8 Hour
Replicate 12.5523301796884
Replicate 22.3957255236243
Replicate 31.812686253022
Condition 3: 24 Hour
Replicate 11.1352459136844
Replicate 21.177804381133
Replicate 31.1915926490606


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113953.p1 GENE.S_Transcript_113953~~S_Transcript_113953.p1 ORF type:complete len:635 (+),score=96.09,PPR_2|PF13041.2|7.5e+03,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|6.9e-11,PPR_2|PF13041.2|8.5e-21,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|8.1e-16,PPR_2|PF13041.2|3e-19,PPR_2|PF13041.2|1e-21,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|2.3e-14,PPR_2|PF13041.2|5.5e-15,PPR_2|PF13041.2|8.3e-08,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|3.3e-10,PPR_1|PF12854.3|3.9e-10,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|1.8e-16,PPR_1|PF12854.3|6.6e-12,PPR_1|PF12854.3|2.9e-14,PPR_1|PF12854.3|8.3e-08,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|5.8e-06,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.2,PPR|PF01535.16|0.0034,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|1.7e-10,PPR|PF01535.16|8.2e-07,PPR|PF01535.16|3.2e-10,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|4.1e-08,PPR|PF01535.16|0.00024,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|27,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.053,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|1e-06,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|95,MRP-S27|PF10037.5|4.1,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|30,MRP-S27|PF10037.5|4.8,MRP-S27|PF10037.5|0.0035,MRP-S27|PF10037.5|79,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|5.8e+03,TPR_19|PF14559.2|0.61,TPR_19|PF14559.2|2.6e+03,TPR_19|PF14559.2|5.4e+02,TPR_19|PF14559.2|32,TPR_19|PF14559.2|22,TPR_19|PF14559.2|1.2e+03 S_Transcript_113953:150-2054(+)
ATGAGGTTGAGCGGAGCTCGAGGTGGGGCGCCATTGTTGTCTAAATCTTCGTTTTCTTCACACTGTAACATTTATCTTCCTTCTCTCTCCCCTTTTCATATTTTTTTTGATTACTTTCATGTTCAATTTCAATATTGTGGCAGATATTATTGTTATTCAACCGCTGCTCAATCGAATGTTGGAGACCCTCAACTGTTCCTCAATTCTGTTAGGGAAAAATGCAATCTAGGGTTTCATGACCTCGATTCTCCTGTTCTTCTTTTCAATCAAATGACTTCTTTGCGTCCCCTGCCTTCCATTATTGATTTCAATCGCCTCTTTTCTTCCATTATCAAGACCAATCGACCCCCTAACGAACTCCATAAATACCACCTTGTCATTTCTCTCTTCAAACACCTTGGCTTGCCCGGTAATGCCTGTAATGGTAAACGTGTCCGCCCCAATCTTTATTCCTTTAACATCCTGATCAATTGTTACTGCCGCTTGGGCCGCCTTGATTTGGGGTTTTCCCTTTTGGGTACTCTCTTCAAGCTTGGGTTTCAGCCTAATTCTTTCGTCTTCAATACCTTACTTGATGGCTTCATCCACCTTCATCAGTTCCCCAAAGCTCTCTCCTTTTTGGATACGCTTGTTTACCTTGGCTTCCAACCTAACAATGTCACCTATGGTATATTGTTTAAAGGCTTCTGTCGAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTCGGAAGGTTGAATCTTCTGGCCTTTGTCAGCCTAACATTGTCATTTACAATACTCTCCTTGACAGCTTGTGCAAAGACAGGCTAGTAACCGAGGCCTTGACTCTCTTTTCTGAAATGAAAAACAAGGGCATCTCCCCTAATGTTGTCACCTACAATTCCTTGCTTCGTGGTCTTTGTAGTTTAGGCTGTTGGGATGAGGCTAAGGAAGCATTGACCGAGATGTTAGAGAGCAATGTAGCACCAAATGTCCGAACCTATAGCATGCTTATAGATATGTATTGTAAAGAGGGGGAGGTTGAGGAAGCAAAATCCATACTTGTCTTGATGATTAAGAGGGGTGAGAGGCCTGACATTGTTACCTACAATTCCCTACTGGATGGATACTGTTTGCGCGGCCAAATGGATAAAGCATCTCAGTTGATGGATCTGATGGCAAGACATGGGTGCCAACCTGATGTTGTCACCTTCACCACAGTGATCAATGGCTATTGCAAGAGTAAAAACCTCGATGAAGCTTTCAAGTTGTTCAAGGAAATGCCTGTCAAAGGATTGAGCCCCAATGTAAATACATATAGCACTCTTCTAGATGGCTTGTGCAAGGGTAACAGGGTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAGATGTTGTCACCTATACTTCGTTGTTGTATGGCCTGTGTAAAAATGGACAACTTGATGAGGCTGTAGCAATGTTTAAAGAGATGGTAAATAATGGTGTGGTAAAGGATCTTGTGAGCTACAATGTGTTAATTGATGGTATGTGTGAAAGGGGGAGATGGAAAGAGGCATCAAATGTCTTCTCCAAGCTGATGTCCAAGGGCCTGCAGCCAAATTGTAGAAAATATAATGTAATGATGAAAGGACTTTGTAAGAAAGGGCTCTTAGATAAGGCTGATCAACTATTGCAGAAGATGGAAGAGCATGGCTGCTTACCAAATGCTGTTACCTACAACACACTTATTAGGGGGTTCCTTTGCAACAATGAAATCACAAAAGGCCTGCAGCTTATTAATGTGATGACTAGCAGAGGTTTCCAAGCTGATGCTGCAACTTCATCTCTTTTCCTTGACCTGCTTTCAGACGATCGCGTAGACAAGTCAGTAAAGGAGCAGCTTCACAAATTTTTGAAGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113953.p1 GENE.S_Transcript_113953~~S_Transcript_113953.p1 ORF type:complete len:635 (+),score=96.09,PPR_2|PF13041.2|7.5e+03,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|6.9e-11,PPR_2|PF13041.2|8.5e-21,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|8.1e-16,PPR_2|PF13041.2|3e-19,PPR_2|PF13041.2|1e-21,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|2.3e-14,PPR_2|PF13041.2|5.5e-15,PPR_2|PF13041.2|8.3e-08,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|3.3e-10,PPR_1|PF12854.3|3.9e-10,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|1.8e-16,PPR_1|PF12854.3|6.6e-12,PPR_1|PF12854.3|2.9e-14,PPR_1|PF12854.3|8.3e-08,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|5.8e-06,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.2,PPR|PF01535.16|0.0034,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|1.7e-10,PPR|PF01535.16|8.2e-07,PPR|PF01535.16|3.2e-10,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|4.1e-08,PPR|PF01535.16|0.00024,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|27,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.053,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|1e-06,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|95,MRP-S27|PF10037.5|4.1,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|30,MRP-S27|PF10037.5|4.8,MRP-S27|PF10037.5|0.0035,MRP-S27|PF10037.5|79,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|5.8e+03,TPR_19|PF14559.2|0.61,TPR_19|PF14559.2|2.6e+03,TPR_19|PF14559.2|5.4e+02,TPR_19|PF14559.2|32,TPR_19|PF14559.2|22,TPR_19|PF14559.2|1.2e+03 S_Transcript_113953:150-2054(+)
MRLSGARGGAPLLSKSSFSSHCNIYLPSLSPFHIFFDYFHVQFQYCGRYYCYSTAAQSNVGDPQLFLNSVREKCNLGFHDLDSPVLLFNQMTSLRPLPSIIDFNRLFSSIIKTNRPPNELHKYHLVISLFKHLGLPGNACNGKRVRPNLYSFNILINCYCRLGRLDLGFSLLGTLFKLGFQPNSFVFNTLLDGFIHLHQFPKALSFLDTLVYLGFQPNNVTYGILFKGFCRVGNNVGALSLLRKVESSGLCQPNIVIYNTLLDSLCKDRLVTEALTLFSEMKNKGISPNVVTYNSLLRGLCSLGCWDEAKEALTEMLESNVAPNVRTYSMLIDMYCKEGEVEEAKSILVLMIKRGERPDIVTYNSLLDGYCLRGQMDKASQLMDLMARHGCQPDVVTFTTVINGYCKSKNLDEAFKLFKEMPVKGLSPNVNTYSTLLDGLCKGNRVQLALQLFKEMQAQGITPDVVTYTSLLYGLCKNGQLDEAVAMFKEMVNNGVVKDLVSYNVLIDGMCERGRWKEASNVFSKLMSKGLQPNCRKYNVMMKGLCKKGLLDKADQLLQKMEEHGCLPNAVTYNTLIRGFLCNNEITKGLQLINVMTSRGFQADAATSSLFLDLLSDDRVDKSVKEQLHKFLKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST