Transcript Information: S_Transcript_113956.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value2.6E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2563169186308
Replicate 26.8446764454022
Replicate 37.2318760390812
Condition 2: 8 Hour
Replicate 17.220407745171
Replicate 25.7426950051582
Replicate 36.2101288297977
Condition 3: 24 Hour
Replicate 16.7770740907828
Replicate 26.3173144078953
Replicate 35.9182434903343


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113956.p1 GENE.S_Transcript_113956~~S_Transcript_113956.p1 ORF type:complete len:635 (+),score=99.97,PPR_2|PF13041.2|7.5e+03,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|6.9e-11,PPR_2|PF13041.2|8.5e-21,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|7e-16,PPR_2|PF13041.2|3e-19,PPR_2|PF13041.2|1e-21,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|2.7e-17,PPR_2|PF13041.2|5.6e-16,PPR_2|PF13041.2|5.9e-16,PPR_2|PF13041.2|3.6e-06,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|3.3e-10,PPR_1|PF12854.3|3.9e-10,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|1.8e-16,PPR_1|PF12854.3|6.6e-12,PPR_1|PF12854.3|1.9e-13,PPR_1|PF12854.3|4.3e-08,PPR_1|PF12854.3|1e-12,PPR_1|PF12854.3|0.0025,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.2,PPR|PF01535.16|0.0034,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|1.7e-10,PPR|PF01535.16|8.2e-07,PPR|PF01535.16|2e-07,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|0.053,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|27,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.053,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|1e-06,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|0.098,MRP-S27|PF10037.5|4.1,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|0.0086,MRP-S27|PF10037.5|0.00037 S_Transcript_113956:150-2054(+)
ATGAGGTTGAGCGGAGCTCGAGGTGGGGCGCCATTGTTGTCTAAATCTTCGTTTTCTTCACACTGTAACATTTATCTTCCTTCTCTCTCCCCTTTTCATATTTTTTTTGATTACTTTCATGTTCAATTTCAATATTGTGGCAGATATTATTGTTATTCAACCGCTGCTCAATCGAATGTTGGAGACCCTCAACTGTTCCTCAATTCTGTTAGGGAAAAATGCAATCTAGGGTTTCATGACCTCGATTCTCCTGTTCTTCTTTTCAATCAAATGACTTCTTTGCGTCCCCTGCCTTCCATTATTGATTTCAATCGCCTCTTTTCTTCCATTATCAAGACCAATCGACCCCCTAACGAACTCCATAAATACCACCTTGTCATTTCTCTCTTCAAACACCTTGGCTTGCCCGGTAATGCCTGTAATGGTAAACGTGTCCGCCCCAATCTTTATTCCTTTAACATCCTGATCAATTGTTACTGCCGCTTGGGCCGCCTTGATTTGGGGTTTTCCCTTTTGGGTACTCTCTTCAAGCTTGGGTTTCAGCCTAATTCTTTCGTCTTCAATACCTTACTTGATGGCTTCATCCACCTTCATCAGTTCCCCAAAGCTCTCTCCTTTTTGGATACGCTTGTTTACCTTGGCTTCCAACCTAACAATGTCACCTATGGTATATTGTTTAAAGGCTTCTGTCGAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTCGGAAGGTTGAATCTTCTGGCCTTTGTCAGCCTAACATTGTCATTTACAATACTCTCCTTGACAGCTTGTGCAAAGACAGGCTAGTAACCGAGGCCTTGACTCTCTTTTCTGAAATGAAAAACAAGGGCATCTCCCCTAATGTTGTCACCTACAATTCCTTGCTTCGTGGTCTTTGTAGTTTAGGCTGTTGGGATGAGGCTAAGGAAGCATTGACCGAGATGTTAGAGAGCAATGTAGCACCAAATGTCCGAACCTATAGCATGCTTATAGATATGTATTGTAAAGAGGGGGAGGTTGAGGAAGCAAAATCCATACTTGTCTTGATGATTAAGAGGGGTGAGAGGCCTGACATTGTTACCTACAATTCCCTACTGGATGGATACTGTTTGCGCGGCCAAATGGATAAAGCATCTCAGTTGATGGATCTGATGGCAAGACATGGGTGCCAACCTGATGTTGTCACCTTCACCACAGTGATCAATGGCTATTGCAAGAGTAAAAACCTCGATGAAGCTTTCAAGTTGTTCAAGGAAATGCCTGTCAAAGGATTGAGCCCCAATGTAAATACATATAGCACTCTTCTAGATGGCTTGTGCAAGGGTAACAGGGTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAGATGTTGTCACCTTTAATACTTTGTTGGATGGCTTATGTAAGGATGGACAGCTTGATGAGGCTGTAACAATGTCTAAGGAGATGGAGAGGAATGGAGTGGTAAAGAACCTTGTGAGCTATAGTGTGTTAATTGATGGTATGTGTGAAAAGGGGAGATGGAAAGAGGCATCGGAAGTCTTCTCCAAGCTGATGGCCAAGGGATTGCAGCCAAATTGTATAACGTACACCGCAATGATAAAAGGACTTTGCAAGAAGGGGCTCTTAGATCAAGCTGATGAATTATTGAAGAAGATGGAGGAGCATGGCTGTTTTCCGAATGATCGTACCTACAATACCATTATTACTGGGTTCCTTTCCAACCACCAAATCACAAGAGGCCTGCAGCTTATTGAGATTATGACTAGCAGAGGTTTTGAAGCAGATGCTGAAACTTTGTCTGTATTCCTTGACTTGCTTTCAGATGACCGTGTAGACAATTCAGTCAAGAAGCAGCTTCATAAATTTTTGAAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113956.p1 GENE.S_Transcript_113956~~S_Transcript_113956.p1 ORF type:complete len:635 (+),score=99.97,PPR_2|PF13041.2|7.5e+03,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|6.9e-11,PPR_2|PF13041.2|8.5e-21,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|7e-16,PPR_2|PF13041.2|3e-19,PPR_2|PF13041.2|1e-21,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|2.7e-17,PPR_2|PF13041.2|5.6e-16,PPR_2|PF13041.2|5.9e-16,PPR_2|PF13041.2|3.6e-06,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|3.3e-10,PPR_1|PF12854.3|3.9e-10,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|1.8e-16,PPR_1|PF12854.3|6.6e-12,PPR_1|PF12854.3|1.9e-13,PPR_1|PF12854.3|4.3e-08,PPR_1|PF12854.3|1e-12,PPR_1|PF12854.3|0.0025,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.2,PPR|PF01535.16|0.0034,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|2.2e-07,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|1.7e-10,PPR|PF01535.16|8.2e-07,PPR|PF01535.16|2e-07,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|0.053,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|27,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.053,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|1e-06,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|0.098,MRP-S27|PF10037.5|4.1,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|0.0086,MRP-S27|PF10037.5|0.00037 S_Transcript_113956:150-2054(+)
MRLSGARGGAPLLSKSSFSSHCNIYLPSLSPFHIFFDYFHVQFQYCGRYYCYSTAAQSNVGDPQLFLNSVREKCNLGFHDLDSPVLLFNQMTSLRPLPSIIDFNRLFSSIIKTNRPPNELHKYHLVISLFKHLGLPGNACNGKRVRPNLYSFNILINCYCRLGRLDLGFSLLGTLFKLGFQPNSFVFNTLLDGFIHLHQFPKALSFLDTLVYLGFQPNNVTYGILFKGFCRVGNNVGALSLLRKVESSGLCQPNIVIYNTLLDSLCKDRLVTEALTLFSEMKNKGISPNVVTYNSLLRGLCSLGCWDEAKEALTEMLESNVAPNVRTYSMLIDMYCKEGEVEEAKSILVLMIKRGERPDIVTYNSLLDGYCLRGQMDKASQLMDLMARHGCQPDVVTFTTVINGYCKSKNLDEAFKLFKEMPVKGLSPNVNTYSTLLDGLCKGNRVQLALQLFKEMQAQGITPDVVTFNTLLDGLCKDGQLDEAVTMSKEMERNGVVKNLVSYSVLIDGMCEKGRWKEASEVFSKLMAKGLQPNCITYTAMIKGLCKKGLLDQADELLKKMEEHGCFPNDRTYNTIITGFLSNHQITRGLQLIEIMTSRGFEADAETLSVFLDLLSDDRVDNSVKKQLHKFLKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST