Transcript Information: S_Transcript_113959.p2


Annotated TAIR IDAT1G62914.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23301576-23303162 | Forward length=528
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.24511942893256
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_113959.p2 GENE.S_Transcript_113959~~S_Transcript_113959.p2 ORF type:5prime_partial len:87 (+),score=13.54,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|2e-11,PPR_1|PF12854.3|1.6e-05,PPR_1|PF12854.3|1.6e-11,PPR|PF01535.16|0.00015,PPR|PF01535.16|5.8e-09,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|4.1e-05 S_Transcript_113959:2-262(+)
CTCTCCTTTCTCGACACCCTTCTCAATCAACAAGGCTTCCAACCGACCCTTGTCACTTATGGTGCTTTGTTTAAAGGCTTCTGTCGAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTCGGAAGGTTGAATCTTCTGGCCTTTGTCAGCCTAACATTGTCATTTACAATACTCTCCTTGACAGCTTGTGCAAAGACAGGCTAGTAACCGAGGCCTTGACTCTCTTTTCTGAAATGAAAAAACAAGGGCATCTCCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_113959.p2 GENE.S_Transcript_113959~~S_Transcript_113959.p2 ORF type:5prime_partial len:87 (+),score=13.54,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|2e-11,PPR_1|PF12854.3|1.6e-05,PPR_1|PF12854.3|1.6e-11,PPR|PF01535.16|0.00015,PPR|PF01535.16|5.8e-09,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|4.1e-05 S_Transcript_113959:2-262(+)
LSFLDTLLNQQGFQPTLVTYGALFKGFCRVGNNVGALSLLRKVESSGLCQPNIVIYNTLLDSLCKDRLVTEALTLFSEMKKQGHLP*

Click here to download the sequence:
Link to NCBI Protein BLAST