Transcript Information: S_Transcript_114039.p1


Annotated TAIR IDAT3G14080.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4667717-4668989 | Forward length=128
E-Value9E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0596103579089
Replicate 26.4817234858236
Replicate 37.1895411851324
Condition 2: 8 Hour
Replicate 16.2650864208526
Replicate 23.6654441274128
Replicate 35.7805688420288
Condition 3: 24 Hour
Replicate 16.664540725944
Replicate 25.3778535943875
Replicate 38.4073481350387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114039.p1 GENE.S_Transcript_114039~~S_Transcript_114039.p1 ORF type:5prime_partial len:177 (-),score=22.88,LSM|PF01423.18|3.7e-16 S_Transcript_114039:215-745(-)
ACCTGTGACGTCCAAAGCCTTCTTTGTAAGCTCAATAACACCCTTGCAAGACCAACTGAGCTATGCCCGTGGGGGCGATTTTTAATGTACTTTGGTGTACATGAGGTGGGAAAACTTCTTGTCTTATTAAGAGATGGCAGAAAGCTTTTAGGGACATTACGTTCTTTTGATCAATTTGCAAATGTTGTTCTTGAAGGTGCTTGTGAAAGAGTAATTGTTGGTGAGCTTTACTGTGACATTCCCTTGGGTTTATATATAATTCGTGGAGAAAATGTAGTTTTGATTGGAGAGCTGGCTACAGATAAGGAAGAGCTTCCTCCACATATGACACGTTTATCTGAAGCAGAAATAAGACAGATAAGAATTCACCTCGACTTCCATTCATTCTTTTTCCTTTTTTTTCTTTCCCTTTTTTTACTTTCACCATTATCCTCACTTGAGAGTTTATCAACTCTTCTGGACCCAATTACACCCTTGTTTCCTGCTCCTGAGAGGATTGGCTCCGGATTTGTTTGCTCTCCACTCCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114039.p1 GENE.S_Transcript_114039~~S_Transcript_114039.p1 ORF type:5prime_partial len:177 (-),score=22.88,LSM|PF01423.18|3.7e-16 S_Transcript_114039:215-745(-)
TCDVQSLLCKLNNTLARPTELCPWGRFLMYFGVHEVGKLLVLLRDGRKLLGTLRSFDQFANVVLEGACERVIVGELYCDIPLGLYIIRGENVVLIGELATDKEELPPHMTRLSEAEIRQIRIHLDFHSFFFLFFLSLFLLSPLSSLESLSTLLDPITPLFPAPERIGSGFVCSPLP*

Click here to download the sequence:
Link to NCBI Protein BLAST