Transcript Information: S_Transcript_11412.p1


Annotated TAIR IDATCG01280.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.2
Annotation TypeOrtholog
Chromosome PositionchrC:145291-152175 | Reverse length=2294
E-Value5E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.301346004816
Replicate 22.250306695445
Replicate 31.0223246166076
Condition 2: 8 Hour
Replicate 10.66198550873584
Replicate 20.099209971794797
Replicate 31.1343244845223
Condition 3: 24 Hour
Replicate 11.1624771702312
Replicate 21.3065611995233
Replicate 30.39147297302841


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11412.p1 GENE.S_Transcript_11412~~S_Transcript_11412.p1 ORF type:3prime_partial len:451 (+),score=0.09,DUF825|PF05695.8|9.8e-273 S_Transcript_11412:1764-3113(+)
ATGTTATTCAACCAAGAAATGGCAGATCTATTCACTCTATCAATAACTGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAGGTATTCAACTCCAGGGATGAATCGAAAAAGAAATCTTTATTGGTTTTACCTCCTATTTTTTATGAAGAGAATGAATCTTTTTATCGAAGGATCCGAAAAAAATGGGTTCGGATCTCCTGCGGGAATTATTTGGAAGATAGAAAACAAAAAATAGGGGTATTTGCTAGCAACAACAAAATGGAGGCAGTCAATCAAAATCAATATAGATTGATCCGAAATCTGATTCAAATCCAATATAGCACCTATGGGTCCATAAGAAATGTATTGAATCGATTCTTTTTAATGAATAGATCCAATCGCAGCTTCGAATATGGAATTCAAAGGGATCAAATAGGAAACGAGACTCTGAATCATAGAACTATAAGGAAATATACGATCAACCAACATTTATCGAATTTGAAAAAGAGTCAGAAGAAATGGTTCGATCCTCTTATTTTTATTTCTCGAACCGAGAGATTCATGAATCGGGATAGATACAAATGGTTCAATGGGAGCAAGAATTTCCAGGAACATTTGGAACAGTTCGTTTCTGAGCAGAAGAGCCGTTTTCAAGTAGTGTTTGATCGATTACGTCAATATTCGATTGATTGGTCTGAGGTTATCGCCAAAAAAGATTTGTCTAAGTCACTTCGTTTCTTTTTGTCCAAGTCACTTCTTTTTTTGTCCAAGTTGCTTCTCTTTTTGTCTAACTCACTTCCTTTTTTCTTTGTGAGTTTCGGGAATATCCCCATTCATAGGTCCGAGATCCACATTTATGAATTGAAAGGTCCGAATGATCAACTCTACAATCTGTTGTTAGAATCAATAGGTCTTCAAATCGTTCATTTGAAAAAATGGAAAGCCTTCTTATTCTTATTGGATGATCATGATACTTTTCAAAAATCGAAATTCTTGGGAGGAACAATATCACCATTTTTGTTCAATAAGATACCAAAGTGGATGATTGACTCATTCCATACTAGAAATAATCGCGGGAAATCCTTTGATAACACGGATTCCTATTTCTCAATGATATCCCACGATCAAAACAATTGGCTGAATCCCGTAAAACCATTTCATAGAAGTTCATTGATATCTTCTTTTTATAAAGCAAATCGACTTCGATTCTTGAATAATCCACATCACTTCTGCCTCTATTGTAACAAAAGGTTCCCTTTTTATATGGAAAAGGCCCGTATCAATAATTCTGATTTTACGTATAGACAATTCCTCAATATCTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11412.p1 GENE.S_Transcript_11412~~S_Transcript_11412.p1 ORF type:3prime_partial len:451 (+),score=0.09,DUF825|PF05695.8|9.8e-273 S_Transcript_11412:1764-3113(+)
MLFNQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNEVFNSRDESKKKSLLVLPPIFYEENESFYRRIRKKWVRISCGNYLEDRKQKIGVFASNNKMEAVNQNQYRLIRNLIQIQYSTYGSIRNVLNRFFLMNRSNRSFEYGIQRDQIGNETLNHRTIRKYTINQHLSNLKKSQKKWFDPLIFISRTERFMNRDRYKWFNGSKNFQEHLEQFVSEQKSRFQVVFDRLRQYSIDWSEVIAKKDLSKSLRFFLSKSLLFLSKLLLFLSNSLPFFFVSFGNIPIHRSEIHIYELKGPNDQLYNLLLESIGLQIVHLKKWKAFLFLLDDHDTFQKSKFLGGTISPFLFNKIPKWMIDSFHTRNNRGKSFDNTDSYFSMISHDQNNWLNPVKPFHRSSLISSFYKANRLRFLNNPHHFCLYCNKRFPFYMEKARINNSDFTYRQFLNIL

Click here to download the sequence:
Link to NCBI Protein BLAST