Transcript Information: S_Transcript_11412.p2


Annotated TAIR IDAT5G38600.1
Annotated Gene NameProline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15457386-15460466 | Forward length=532
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.706379807256
Replicate 211.538585343298
Replicate 37.3134987917726
Condition 2: 8 Hour
Replicate 19.8047771573025
Replicate 29.1287428357505
Replicate 38.8203507330957
Condition 3: 24 Hour
Replicate 16.5283559856948
Replicate 29.7688843001497
Replicate 38.8422109696097


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11412.p2 GENE.S_Transcript_11412~~S_Transcript_11412.p2 ORF type:complete len:174 (+),score=25.76 S_Transcript_11412:1065-1586(+)
ATGCGGGAACTTGGATATCCACCTGCATATTTAGATCGAGAAGAAGAGGATCAACCTTCAGGAATTACAATTTTTGGTGACGAGGAACCTCATGATACGGCCTTGAAGAATGGCCTTCCATCAAAAAATTCCAATAAGAAAATGATTGTAGACTTTCCAGGAATTAATGCCCCTATACCAGAAAACGCTGATCAGTGGCGTTGGGCAGCACGCGCACCTACACCAAGTGGTCCACCGCATTCTGATTTTTCCTGGAACCAGTCTCATAACAGACAGAATTATTTTCAACAGTCCTTCAATAATGGGCATTTCCATGGTGATTATAGACACAGAAATTATGCTCAAACCCCATTGCATCACTTTGACCCTGGGTCAAGCCCCCCTGTATCTCACTTTCGACATGATTATCCTCCAAGTGAATCTTTCAGCCCGAGAGGTATTCCAATTCCAGCAAATGCCGCTTATGGGAGGTCACCAGATTCAGGTATACCTTTTCTGAATCATAATTATGGTAGTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11412.p2 GENE.S_Transcript_11412~~S_Transcript_11412.p2 ORF type:complete len:174 (+),score=25.76 S_Transcript_11412:1065-1586(+)
MRELGYPPAYLDREEEDQPSGITIFGDEEPHDTALKNGLPSKNSNKKMIVDFPGINAPIPENADQWRWAARAPTPSGPPHSDFSWNQSHNRQNYFQQSFNNGHFHGDYRHRNYAQTPLHHFDPGSSPPVSHFRHDYPPSESFSPRGIPIPANAAYGRSPDSGIPFLNHNYGSV*

Click here to download the sequence:
Link to NCBI Protein BLAST