Transcript Information: S_Transcript_114148.p1


Annotated TAIR IDAT4G37380.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17572040-17573938 | Reverse length=632
E-Value2.2E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5902857948318
Replicate 25.7766925339865
Replicate 37.1269248272589
Condition 2: 8 Hour
Replicate 110.057242436629
Replicate 29.5274434270129
Replicate 39.7165299019552
Condition 3: 24 Hour
Replicate 14.7548800026845
Replicate 25.6480792256512
Replicate 35.6491014282752


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114148.p1 GENE.S_Transcript_114148~~S_Transcript_114148.p1 ORF type:complete len:634 (+),score=118.22,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.77,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|25,PPR_2|PF13041.2|1e-09,PPR_2|PF13041.2|0.61,PPR_2|PF13041.2|0.74,PPR_2|PF13041.2|3.1e+02,PPR|PF01535.16|5.3e+02,PPR|PF01535.16|29,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0066,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|0.0063,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|3.5,DYW_deaminase|PF14432.2|6e-39,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|11,PPR_3|PF13812.2|17,PPR_3|PF13812.2|0.077,PPR_1|PF12854.3|39,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|2.6e+03 S_Transcript_114148:165-2066(+)
ATGTCTTCAACACCCAGTCCCCTTTTCACATCTCAATCCCTGCCACCACCACCCACTAACCACCCTGCTTCTCTCTCTATCCCTTTAAACCACCGTCCATCACCAGAAAGACTCGCATTTCTATTAGACAAATGCAAGAACTTAACCCACTTACTCCAAATTCACGCCCTTGTTCTCCGTCAAGGTCACGAAAACAACCCCATCTTGAATTTCAAGCTCCAAAAATCCTACTCTTCTCTTGGCCACCTTGACCGCTCTGTCTCTCTCTTCCACCTCACTGATAACCCAAATGTATTCTTATTCACTGACCTCATTAATGCTCACTCTGCTCGTGGGCTTCGCCACCAAGCTCTTTGTTTTTATGTTCAGATGTTGAGCCAAGGTGTTGAACCAAATGCCTTCACTTTGTCTTCCTTGTTCAAGTGTTGTTCTGTTCATGATGGGGTTTTGCTCCATTCGCAGGCGATTAAGTTGGGTTTTGATGGGGATTTATTTGTGAGAACTGGGTTGTTGGACCTCTATGCGAAAGGTGGGAATGTGGTCGCTGCACGCCAATTGTTCGACACAATGCCTGAGAGAAGTTTGGTCTCTTTGACTGCAATGTTGACTTGCTATGCTAAACATGGGGGTGTTGATGATGCGAGGGTTTTGTTTGATGGGATTGAAGAGAAGGATGTGGTGTGCTGGAATGCGATGATTGATGGGTATACTCAGCATGGTCGGCCTAATGATGCATTGGATCTTTTTCGGAGAATGCTGAAGGTGAAAGTGAAGCCCACTGAAGTTACTATACTGTCCGTTTTATCTGCGTGTGGGCAGCTTGGTTCGCTTGAGTTAGGGAGGTGGATTCATTCTTACATTGTAAATAATGGGATTCGAGTTAATGTCCATGTTGGCACTGCTCTGGTTGATATGTATGGTAAATGTGGTAGCTTGGAGGATGCTAGGCTTGTTTTCGACAACATTAACAGCAAAGATGTTGTTGCTTGGAATTCGATGATAGTTAGTTATGCAATGCACGGATTCAGCCAGCAAGCTTTGCAGTTGTTTGACAAGATGTGTAGGATGAGACTTTGTCCCAGTGATATCACTTTCATTGGAGTCTTGAATGCCTGTGCTCATGCAGGTTTGGTTTCCAAAGGGAAGGAATTTTTCTCTTTGATGAAGGAAACCTATGGTATTGAACCAAAGGTTGAGCATTATGGATGTATGGTAAATCTCCTTGGCCGTGCAGGGTATTTAGAAGAAGCTTACGAGCTTGTCAAGGGCATGATGGTTGATCCCGATCCTGTGCTTTGGGGAACGTTGCTTGGTGCTTGCAGGCTTCATGGTAATATAACAATGGGAGAAGAGATAGCTGAGTTTCTTGTCAGCAAAAATCTTGCAAATGATGGTACTTATGTTCTTCTGTCAAACATGTATGCCTCAGCAGGCAACTGGGATGGTGTGGCCAACGTGAGAGCCATGATGAAAGCCAGGGGGATAGAAAAGGAGCCGGGTTGTAGCTCCATTGAGGTGAATAACAAGATACATGAGTTCCTTGCTGGGGATATGAGACACCCAAAGAGCACAGAAATCTATATGATGCTAGAGGACATTAATAAGTTGCTGAAAGCTCATGGTTACTCACCACAGACAGATACTGTATTACATGATGTTGGAGGAAGGGAGAAAGAGCTGTCTTTGGGAGTTCACAGTGAGAGACTTGCCATCGCCTTTGGGCTCATCAGCACTTCTCCAGGAACTACAATCAAGATCGTGAAGAACCTACGTGTATGTTCAGACTGTCACACTGTTACAAAGCTGATCTCAAAGATTACAGGACGAATGATTGTCGTTAGAGATAGAAATCGGTTCCACCACTTCGAAAATGGCAAGTGCTCATGTGGGGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114148.p1 GENE.S_Transcript_114148~~S_Transcript_114148.p1 ORF type:complete len:634 (+),score=118.22,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.77,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|25,PPR_2|PF13041.2|1e-09,PPR_2|PF13041.2|0.61,PPR_2|PF13041.2|0.74,PPR_2|PF13041.2|3.1e+02,PPR|PF01535.16|5.3e+02,PPR|PF01535.16|29,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0066,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|0.0063,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|3.5,DYW_deaminase|PF14432.2|6e-39,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|11,PPR_3|PF13812.2|17,PPR_3|PF13812.2|0.077,PPR_1|PF12854.3|39,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|2.6e+03 S_Transcript_114148:165-2066(+)
MSSTPSPLFTSQSLPPPPTNHPASLSIPLNHRPSPERLAFLLDKCKNLTHLLQIHALVLRQGHENNPILNFKLQKSYSSLGHLDRSVSLFHLTDNPNVFLFTDLINAHSARGLRHQALCFYVQMLSQGVEPNAFTLSSLFKCCSVHDGVLLHSQAIKLGFDGDLFVRTGLLDLYAKGGNVVAARQLFDTMPERSLVSLTAMLTCYAKHGGVDDARVLFDGIEEKDVVCWNAMIDGYTQHGRPNDALDLFRRMLKVKVKPTEVTILSVLSACGQLGSLELGRWIHSYIVNNGIRVNVHVGTALVDMYGKCGSLEDARLVFDNINSKDVVAWNSMIVSYAMHGFSQQALQLFDKMCRMRLCPSDITFIGVLNACAHAGLVSKGKEFFSLMKETYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKGMMVDPDPVLWGTLLGACRLHGNITMGEEIAEFLVSKNLANDGTYVLLSNMYASAGNWDGVANVRAMMKARGIEKEPGCSSIEVNNKIHEFLAGDMRHPKSTEIYMMLEDINKLLKAHGYSPQTDTVLHDVGGREKELSLGVHSERLAIAFGLISTSPGTTIKIVKNLRVCSDCHTVTKLISKITGRMIVVRDRNRFHHFENGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST