Transcript Information: S_Transcript_11415.p1


Annotated TAIR IDAT5G38600.1
Annotated Gene NameProline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15457386-15460466 | Forward length=532
E-Value1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4849104748221
Replicate 27.4051577407576
Replicate 36.5092009706826
Condition 2: 8 Hour
Replicate 17.5266083472234
Replicate 27.4314791329196
Replicate 37.8920266219135
Condition 3: 24 Hour
Replicate 18.3146615362123
Replicate 26.9795129075949
Replicate 35.4109576232429


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11415.p1 GENE.S_Transcript_11415~~S_Transcript_11415.p1 ORF type:5prime_partial len:289 (+),score=39.63,PSP|PF04046.12|2.4e-15 S_Transcript_11415:1-867(+)
GCTTTAATTTCGGTAATATTACATCGTAAAACTAATATTCCTCCTCCCTCAACCTGGCTGCATAGTGGCCGGGATTTGCGTGAGGCTTTTCGTTGCTTCAATTGTGGTTCATATAACCATCCACTGAGTGATTGTCCAAAGCCTCGTGATACCGCGGCTGTAAATAGTGCTCGGAAACAATTTCTAAGCAAGAAGAGCCATAGTGCTGGTCCTCGTGTCCCAACCCGATATTACCAAGAATCTCCTGGTGGCAAGTTTGACGGACTTAAACCTGGTGCTCTTTCAGCTGAAACAAGGACATTGCTGGGTCTTGGGGAGCTCGATCCACCTCCATGGCTTTACAGGATGCGGGAACTTGGGTATCCGCCTGCATATTTAGATCGAGAAGAAGAGGATCAACCTTCAGGAATTACAATTTTTGGTGACGAGGAACCTCATGATACGGCCTTGAAGAATGGCCTTCCATCAAAAAAATCCAGTAAGAAAATGAATGTAGACTTCCCAGGAATTAATGCCCCTATACCAGAAAACGCTGATCAGTGGCGTTGGGCAGCACCTGCACCTACACCTAGTGGTCCACCGCATTCTGATATTTCCTGGAACCAGTCGCACAACAGACAGAATTATCCTCAACAGTCCTTCAATAATGGGCATTTCCATCGTGATTATAGACAAAGAAATTATGCTCAAACCCCATCGTATCACTTTGGCCCTGGGTCAAGCCCCCCTTTATCTCACTTTCGACATGACTATCCTCCAAGTGAATCTGTCAGCCCGAGAGGTATTCCAATTCCAGCAAATGCCGCTTATGGGAGGTCACCAGATTCAGGTAGACCTTTTCTGAATTATAATTATGGTAGTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11415.p1 GENE.S_Transcript_11415~~S_Transcript_11415.p1 ORF type:5prime_partial len:289 (+),score=39.63,PSP|PF04046.12|2.4e-15 S_Transcript_11415:1-867(+)
ALISVILHRKTNIPPPSTWLHSGRDLREAFRCFNCGSYNHPLSDCPKPRDTAAVNSARKQFLSKKSHSAGPRVPTRYYQESPGGKFDGLKPGALSAETRTLLGLGELDPPPWLYRMRELGYPPAYLDREEEDQPSGITIFGDEEPHDTALKNGLPSKKSSKKMNVDFPGINAPIPENADQWRWAAPAPTPSGPPHSDISWNQSHNRQNYPQQSFNNGHFHRDYRQRNYAQTPSYHFGPGSSPPLSHFRHDYPPSESVSPRGIPIPANAAYGRSPDSGRPFLNYNYGSL*

Click here to download the sequence:
Link to NCBI Protein BLAST