Transcript Information: S_Transcript_114176.p1


Annotated TAIR IDAT3G23020.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8177215-8179743 | Reverse length=842
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4566311949142
Replicate 24.2350412139138
Replicate 33.964128330613
Condition 2: 8 Hour
Replicate 16.5446887524994
Replicate 26.840128434675
Replicate 36.7622688953734
Condition 3: 24 Hour
Replicate 13.6910320380659
Replicate 23.1781436923154
Replicate 33.9427563667768


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114176.p1 GENE.S_Transcript_114176~~S_Transcript_114176.p1 ORF type:complete len:870 (+),score=173.12,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|91,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|5.5,PPR_2|PF13041.2|8.5e-10,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|8.6e-06,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|1.4e-09,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.00056,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.72,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|0.033,PPR|PF01535.16|4.1e-05,PPR|PF01535.16|0.34,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.31,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|0.0079,PPR|PF01535.16|0.0069,PPR|PF01535.16|0.0003,PPR|PF01535.16|1.1,PPR|PF01535.16|0.00037,PPR|PF01535.16|7.6e+03,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|8.6e+03,PPR_3|PF13812.2|0.00057,PPR_3|PF13812.2|17,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|4.2,PPR_3|PF13812.2|36,PPR_3|PF13812.2|0.046,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|38,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|58,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|1.6e+04,PPR_1|PF12854.3|11,PPR_1|PF12854.3|3.8,PPR_1|PF12854.3|0.66,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|42,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|64,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|0.068,PPR_1|PF12854.3|52,PPR_1|PF12854.3|71,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|1.6e+03,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|0.45,TPR_11|PF13414.2|4.1e+03,TPR_11|PF13414.2|0.038,TPR_14|PF13428.2|2.2e+03,TPR_14|PF13428.2|6.7e+03,TPR_14|PF13428.2|2.2e+03,TPR_14|PF13428.2|5.6e+03,TPR_14|PF13428.2|5e+03,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|8.1,TPR_19|PF14559.2|5.4e+03,TPR_19|PF14559.2|4.1e+02,TPR_19|PF14559.2|0.85,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|1.1e+03,TPR_19|PF14559.2|13,TPR_12|PF13424.2|4e+02,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|4.1e+02,TPR_12|PF13424.2|6.5e+02,TPR_12|PF13424.2|1.2e+02,TPR_12|PF13424.2|7e+02,TPR_12|PF13424.2|1.3,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|5.7e+03,TPR_16|PF13432.2|1e+04,TPR_16|PF13432.2|5.8e+03,TPR_16|PF13432.2|9,TPR_16|PF13432.2|1.8,TPR_16|PF13432.2|3e+02,TPR_16|PF13432.2|31 S_Transcript_114176:206-2815(+)
ATGTTCTGTAAAGCTCAATGCTTTGACATGAGCTGTTGTTTCCAGGTCCCTACCCACTTAACTCACTCAATCAGTATCAGAGTCTCAGTTTCTCCACTAGAAACACATGACTCAACCAAGAGCATTAAAGATACAAACTTTTTGGAAATACCCGACAAAGGGCTTAGAAAATTTCGCAAATTTCAAAGGCAAAATAGCAACCCAAGCCATGTTGTTGAAAAACAGGGCACTTTGAGATTGAACCCATCTGGGTTTGTTGATAAAGTGGCTGATGACTATAGTGAGTCTGGGTTTCAATCTGTTAGTGAAAATAAGTTGAACGGTGTGGTTGAATTGAAAGAGGGGCAAAGAAAATTGAAGGGTAAGAAAGTGCACACCAAGTGTTCGACGAAATGGGCCTCTTATGGAGGGTGTATTCCATCAATATTGAGGGCTTTGGAGACTATTGATGACTTGGACGAGGCGTTTCGGCCTTGGGAAGAGAGGCTTAGTAACAAGGAGAGGAGTATCATCTTGAAGGAGCAATTGAGTTGGGAAAGAGCAATTGAGATTTTTGAGTGGTTTAAGAGGAAAGGATGCTATGAGTTGAATGTGATTCATTACAATATCATGCTTAGGATTCTAGGAAAAGCGCGTAAATGGGGTCATGTTGAGAGTTTGTGGGATGAGATGAGGGTGAAGAAGATTATGCCCATCAATTCTACTTATGGTACTCTTATTGATGTTTATAGCAAAGGTGGTCTCAAAGATAAGGCTCTCCTTTGGTTGCAAAGAATGAATGAACAAGGGATTGAGCCTGATGAGGTTACTATGGGGATTATTGTTCAAATGTACAAGAAGGCGGGAGAGTTTCGTAAAGCTGAGGAGTTCTTCAAGGTGTGGTCTTCATCCAAGTCGAAGAAAGAGGACATAGTTAAAACAAAGAGTATTAGTGGTGCAAAATTGAGTTCAGGGGCTCACCTTAGTTTGAGCATATATACATATAATACCCTCATCGACACATATGGAAAGGCAGGACAGATTCAAGAAATGTCTCAAACTTTCGAGAAGATGTTGGATGATGAAGTTGTTCCTGACACAATAACCTTTAACACAATGATACACATATATGGAAACAGTGACATTGTAGAAGAGGTCAATATGTTGGTGAACAAGATGGATGAACTTAAATGCACTCCTGATACAAGGACATATAATATCCTGATCTCTCTATATGCTAAGCGCGATGACATCAATGTGGCATTTAGTTACTTTAGTAAGATGAAAGAGGCTCACCTTGAGCCTGACCCTGTCAGCTATCGCACCCTCTTGTATGCGTTTTCGATAAGGCTTATGGTTCCCGAAGCAGATATGCTTGTTTCAGAAATGGATGAAAGGGGCCTTGAAATTGATGAGTTTACGCAGTCTGCCTTGACTAGAATGTATATTGATGCAGGGTTGCTTGACAAGTCATGGTCATGGTTTGAACGTTTTCATCTTGAAGGCGATATGACTTCAGAGTGCTATTCTGCTAACATTGATGCATATGGAGAACGTGGGTTTGTAGACGAGGCTGAGAAAGTGTTTCTCTGTTGCCAAGAGAGGAAAAAGATTGGTGTCGTTGTATTCAATGTGATGATCAAAGCTTATGGCGTAGGTAAGAAATACGATAAGGCATGCCTGTTGTTCAATAGCATGGAGGAGCAAGGTGTTCTTCCAGACAGATGCAGCTACGTTTCTCTGATACAATCACTGGCTGCTGCTGATTTGCCTCTCATCGCAAAGCCGTATTTGTTGAAGATGCAGGAAGCAGGTCTGGTGAATGATTGTGTCCCATACTCTGCTCTCATTTCAAGCTTTGCCAAATTAGGCCAATTGGAATCGGCCAAAAGCTTATACAAAGAGATGATTGGATATGATGTGCAGCCTGATGTTGTTCTGTATGGAGTACTGATAAATGCTTTTGCAGAGAGTGGAAATGTTGGAGAAGCAATGGAATACATCGACGCCTTGGAAAAAGCAGGTCTTTCTGTGAATGCTGTAATATGCAATTCCTTGATCAAACTTTACACGAAAGTTGGATACTTGGAAGAAGCAAGAGAAACATACAGACTGCTTCAATCATCTGATAAGGGTGTCGATGTATATTCTTCAAACTGTTTGATCGATCTCTATAGCAAACGGTCAATGATCAGAGAGGCGGAAGAGATTTTCCATGATGTTCAGGAAAGAGGTATAGCAAACGAGTTCTCATTCGCAATGATGCTGTGTATGTACAAACGTGTAGGGAGACTTGAAGAAGCCATTAACATTGCAGCGAAAATGCAGGAACTGGGTCTCCTGACGGAGCTTTTAAGCTATAATAATGTGCTTGCCCTTTTTGTTATGGATGGGAGACTGAAAGAGGCAGTAAAAGCATTCAAGGAGATGATTGAACGCGAAATTGAGCCTGATGATTCTACTTACAGGTCACTTGGAGTAGCTCTTGTAAAATCCGGGGTTCCAAAGCATGCTGTTGCCAAGATGGAGGTAGAACGAAAAAAAGATGCTCATAGGGGTGTACAGGCATGGATTTCGGCTCTGACTTCTGTTGTATGCAGGGACAACTATGGCTATTGTGATGATAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114176.p1 GENE.S_Transcript_114176~~S_Transcript_114176.p1 ORF type:complete len:870 (+),score=173.12,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|91,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|5.5,PPR_2|PF13041.2|8.5e-10,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|8.6e-06,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|1.4e-09,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.00056,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.72,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|0.033,PPR|PF01535.16|4.1e-05,PPR|PF01535.16|0.34,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.31,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|0.0079,PPR|PF01535.16|0.0069,PPR|PF01535.16|0.0003,PPR|PF01535.16|1.1,PPR|PF01535.16|0.00037,PPR|PF01535.16|7.6e+03,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|8.6e+03,PPR_3|PF13812.2|0.00057,PPR_3|PF13812.2|17,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|4.2,PPR_3|PF13812.2|36,PPR_3|PF13812.2|0.046,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|38,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|58,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|1.6e+04,PPR_1|PF12854.3|11,PPR_1|PF12854.3|3.8,PPR_1|PF12854.3|0.66,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|42,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|64,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|0.068,PPR_1|PF12854.3|52,PPR_1|PF12854.3|71,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|1.6e+03,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|0.45,TPR_11|PF13414.2|4.1e+03,TPR_11|PF13414.2|0.038,TPR_14|PF13428.2|2.2e+03,TPR_14|PF13428.2|6.7e+03,TPR_14|PF13428.2|2.2e+03,TPR_14|PF13428.2|5.6e+03,TPR_14|PF13428.2|5e+03,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|8.1,TPR_19|PF14559.2|5.4e+03,TPR_19|PF14559.2|4.1e+02,TPR_19|PF14559.2|0.85,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|1.1e+03,TPR_19|PF14559.2|13,TPR_12|PF13424.2|4e+02,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|4.1e+02,TPR_12|PF13424.2|6.5e+02,TPR_12|PF13424.2|1.2e+02,TPR_12|PF13424.2|7e+02,TPR_12|PF13424.2|1.3,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|5.7e+03,TPR_16|PF13432.2|1e+04,TPR_16|PF13432.2|5.8e+03,TPR_16|PF13432.2|9,TPR_16|PF13432.2|1.8,TPR_16|PF13432.2|3e+02,TPR_16|PF13432.2|31 S_Transcript_114176:206-2815(+)
MFCKAQCFDMSCCFQVPTHLTHSISIRVSVSPLETHDSTKSIKDTNFLEIPDKGLRKFRKFQRQNSNPSHVVEKQGTLRLNPSGFVDKVADDYSESGFQSVSENKLNGVVELKEGQRKLKGKKVHTKCSTKWASYGGCIPSILRALETIDDLDEAFRPWEERLSNKERSIILKEQLSWERAIEIFEWFKRKGCYELNVIHYNIMLRILGKARKWGHVESLWDEMRVKKIMPINSTYGTLIDVYSKGGLKDKALLWLQRMNEQGIEPDEVTMGIIVQMYKKAGEFRKAEEFFKVWSSSKSKKEDIVKTKSISGAKLSSGAHLSLSIYTYNTLIDTYGKAGQIQEMSQTFEKMLDDEVVPDTITFNTMIHIYGNSDIVEEVNMLVNKMDELKCTPDTRTYNILISLYAKRDDINVAFSYFSKMKEAHLEPDPVSYRTLLYAFSIRLMVPEADMLVSEMDERGLEIDEFTQSALTRMYIDAGLLDKSWSWFERFHLEGDMTSECYSANIDAYGERGFVDEAEKVFLCCQERKKIGVVVFNVMIKAYGVGKKYDKACLLFNSMEEQGVLPDRCSYVSLIQSLAAADLPLIAKPYLLKMQEAGLVNDCVPYSALISSFAKLGQLESAKSLYKEMIGYDVQPDVVLYGVLINAFAESGNVGEAMEYIDALEKAGLSVNAVICNSLIKLYTKVGYLEEARETYRLLQSSDKGVDVYSSNCLIDLYSKRSMIREAEEIFHDVQERGIANEFSFAMMLCMYKRVGRLEEAINIAAKMQELGLLTELLSYNNVLALFVMDGRLKEAVKAFKEMIEREIEPDDSTYRSLGVALVKSGVPKHAVAKMEVERKKDAHRGVQAWISALTSVVCRDNYGYCDDN*

Click here to download the sequence:
Link to NCBI Protein BLAST