Transcript Information: S_Transcript_11418.p1


Annotated TAIR IDAT5G38600.1
Annotated Gene NameProline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15457386-15460466 | Forward length=532
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76474141480404
Replicate 20.25359528227028
Replicate 30.21198547222529
Condition 2: 8 Hour
Replicate 10.36767914339884
Replicate 20
Replicate 30.36751461387899
Condition 3: 24 Hour
Replicate 10.87881715192045
Replicate 20.52100716267465
Replicate 30.72477139095161


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11418.p1 GENE.S_Transcript_11418~~S_Transcript_11418.p1 ORF type:internal len:174 (+),score=30.72 S_Transcript_11418:1-519(+)
GCTTTAATTTCGGTAATATTACATCGTAAAACTAATATTCCTCCTCCCTCAACCTGGCTGCATAGTGGCCGGGATTTGCGTGAGGCTTTTCGTTGCTTCCATTGCGATTCTTTTAAGCAACTGGATCATTGTCCAATGCCTCGTGATATTGCGGCTCTAAGTAGTGCTCAGAAACTACTTCTAAGCAAGAAGAGCCATAGTGCTGGTCCTTGTGTCCCAACCCAATATTACCAAGAATCTCTTGGTGGCAAATTTGATGGGCTTAAACCTGGTGCTCTTTCAGCTGAAACGAGGACATTGCTGGGTCTTGGGATGCAGGAACTTGGATATCCACCTGCATATTTAGATCGAGAAGAAGAGGATCAACCTTCAGGAATTACAATTTTTGGTGACGAGGAACCTCATGATACGGCCTTGAAGAATGGCCTTCCATTAGATTCACAAAAATCCAAGATTGTAAATGTCCCAGGAATTAATACCCTTATACCAGAAAACGCTGATCAGTGGCGTTGGGCAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11418.p1 GENE.S_Transcript_11418~~S_Transcript_11418.p1 ORF type:internal len:174 (+),score=30.72 S_Transcript_11418:1-519(+)
ALISVILHRKTNIPPPSTWLHSGRDLREAFRCFHCDSFKQLDHCPMPRDIAALSSAQKLLLSKKSHSAGPCVPTQYYQESLGGKFDGLKPGALSAETRTLLGLGMQELGYPPAYLDREEEDQPSGITIFGDEEPHDTALKNGLPLDSQKSKIVNVPGINTLIPENADQWRWAA

Click here to download the sequence:
Link to NCBI Protein BLAST