Transcript Information: S_Transcript_114183.p1


Annotated TAIR IDAT1G17980.1
Annotated Gene Namepoly(A) polymerase 1
Annotated Gene Symbol(s)PAPS1
Annotation TypeOrtholog
Chromosome Positionchr1:6187742-6191418 | Reverse length=713
E-Value2E-232
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66997765347308
Replicate 21.7588517549347
Replicate 30.49008669313064
Condition 2: 8 Hour
Replicate 11.133377387484
Replicate 20.84481106751415
Replicate 31.4309939650897
Condition 3: 24 Hour
Replicate 11.5276142301115
Replicate 21.299603181301
Replicate 30.9877164242563


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114183.p1 GENE.S_Transcript_114183~~S_Transcript_114183.p1 ORF type:complete len:715 (+),score=138.77,PAP_central|PF04928.13|2.4e-102,PAP_RNA-bind|PF04926.11|3.1e-09,PAP_RNA-bind|PF04926.11|0.007,NTP_transf_2|PF01909.19|1.5e-09 S_Transcript_114183:560-2704(+)
ATGTTTAAGTTTAACAACGGTTGCAGAAACCCTAGAATGGCTGTTCGTGGTGTGCCAGATAATAAAGTGAATGCACCAGGGCGTCTTGGGATATCAGATCCTATTTCAGTAGCTGAGCCTTCTGAGTCTGACATTATCAAAAGCAAAGAATTAGAAAAGTTTATTGTAGATTCTGGGCTATTTGAATCAAAGGAAGAGGCTATTAAGAGGGAAGAAGTGTTGGGCAGATTGGATGAGGTGGTGAAGTTGTGGGTGAAGAATGTGACTAGGGCAAAGGGGTTCAATGATCAAGTGGTGGAAGAATCAAATGCAAAGATTTTCACCTCGGGCTCATATCGCTTAGGGGTGCATGGCCCAGGTGCTGATATAGACACACTGTGTGTTGGACCTAGATATGCTACAAGAGAGGACTTCTTTGGCGAGCTCCATAACTTGCTTGCGGAGATGCCTGAAGTACAGGAGCTCAACCCTGTACCTGATGCTTATGTTCCTGTGCTGAAATTTAAGTTTGATGGAGTTTCAATTGACCTTCTTTATGCAAGCTTGGACCTATGGATTATTCCAGAAGATCTCAATCTCTTACAAGACTCCGTTTTACGAAATGTGGATGAGCAGACAGCTCGCAGTCTCAATGGGTGCAGAGTTACTGACCAGATTTTGCATTTAGTTCCAAATATTCAGAATTTCCTCTCCTCTCTGAGATGCATCAGATTTTGGGCAAAGCAACGTGGTATTTACTCAAATGTCTCAGGTTTCTTGGGTGGCATCAATTGGGCAATTCTTGTTGGATGGATTTGTCAGCTGTACCCCAACGCTTTGCCAGCAATGTTGGTCTCTCGTTTTTTTAGGATATACAGCCAGTGGAAGTGGCCTCGTCCAATTATGCTGTGTGAAATAAAAGGTCCTTTAGGTCTACCAGTTTGGAATCCAAAATGGAATCTTAAAGATAGGCAGCATTTGATGCCAATAATAACCCCAGCATATCCTTCATTGAACTCTAGCTATAATGTGTCATCAAGTACATTGCTTATCATGCAACAAGAGTTTCAGAGGGGGCTCAAAATCTGTGAGGAGTTGGAAACATCACATAAATCTGACTGGAATGCGCTGTTTGAGCCTTTTGCTTTCTTTGAAGCATACAAGGATTATCTCAAGATTGATATTGGCGCTGGCAATGAGGTTGACTTCAGGCAATGGAAAGGGTGGGTTCAATCCCGAATTCGTCTGTTGACCTTGAAGATTGAGAGGGACACAAGAGCTATGCTGCAGTGCCATCCTTATCCTACTGAATTCCCAGGCAATTCCAAGAAATTTCAATGTTGTTTCTTCATGGGTCTAAAAAAACAAGAAGGTTTTCAAGCCAAGGATACTGGTTCCTTTGATTTAAGGTGTACCATTCAGCAATTCAAGTACGAAGTTGGAAGTTCCAATATTTGCAGACATGGAATGTTGGTTCATGTTTCTTATGTCAGAAGCAGGGACCTTCCTGCATTTGTTTTTCCTGGAGAAATCATGCCTTCTCGTCCTGTGCAAGCAGCTTCAAAACGCAAAGCTAGCGGTATACCTCTGACTGATAACCCTAATGGTGGCAGAAGGATAAAACTGGACACATCAAACACCATGCCAAGGGCTTCAACACCAGTGCTGGCAACAGAACAGAATTCTATGGATTCTAATGCAACCTGCGTTACATCACCTTCATGTAGCGGCGGTGTTGAGGAGCTCGAGCAAGGGACCTCATCGATCGTGCCATTATCTTCTACTAGTTATTCTTCATCGAGTCAAGAGGCATCGGAAAGCATGATTTTAGACAGAAGTGGTGATCAGGCTGAAGCCAGTGGCAGTACCTCATCAAGAAAATTAGACCACTTGGAAGAAGTGGCTTCAAGTAGCCAATCAGAAGATAGTGATCAGAACATGAAAGTCGCCATCAAGAAGCCATCGGTGGTAAAGCTCGTTGCGGCAACAGATAAGGCTAATGGTTCGTGTTGCGAATTCCTGACCAATAGAGATCTGGAAAAGCTTGAGCCTCCTACACCATGGGCAAACCAATCATGTGCAATTGCTTCCAACGTCCCTGCAAAGAAGCCACTTATCAGATTCAACTTCACTTCCTTACGAGGCATGACCGGTAACTGCGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114183.p1 GENE.S_Transcript_114183~~S_Transcript_114183.p1 ORF type:complete len:715 (+),score=138.77,PAP_central|PF04928.13|2.4e-102,PAP_RNA-bind|PF04926.11|3.1e-09,PAP_RNA-bind|PF04926.11|0.007,NTP_transf_2|PF01909.19|1.5e-09 S_Transcript_114183:560-2704(+)
MFKFNNGCRNPRMAVRGVPDNKVNAPGRLGISDPISVAEPSESDIIKSKELEKFIVDSGLFESKEEAIKREEVLGRLDEVVKLWVKNVTRAKGFNDQVVEESNAKIFTSGSYRLGVHGPGADIDTLCVGPRYATREDFFGELHNLLAEMPEVQELNPVPDAYVPVLKFKFDGVSIDLLYASLDLWIIPEDLNLLQDSVLRNVDEQTARSLNGCRVTDQILHLVPNIQNFLSSLRCIRFWAKQRGIYSNVSGFLGGINWAILVGWICQLYPNALPAMLVSRFFRIYSQWKWPRPIMLCEIKGPLGLPVWNPKWNLKDRQHLMPIITPAYPSLNSSYNVSSSTLLIMQQEFQRGLKICEELETSHKSDWNALFEPFAFFEAYKDYLKIDIGAGNEVDFRQWKGWVQSRIRLLTLKIERDTRAMLQCHPYPTEFPGNSKKFQCCFFMGLKKQEGFQAKDTGSFDLRCTIQQFKYEVGSSNICRHGMLVHVSYVRSRDLPAFVFPGEIMPSRPVQAASKRKASGIPLTDNPNGGRRIKLDTSNTMPRASTPVLATEQNSMDSNATCVTSPSCSGGVEELEQGTSSIVPLSSTSYSSSSQEASESMILDRSGDQAEASGSTSSRKLDHLEEVASSSQSEDSDQNMKVAIKKPSVVKLVAATDKANGSCCEFLTNRDLEKLEPPTPWANQSCAIASNVPAKKPLIRFNFTSLRGMTGNCV*

Click here to download the sequence:
Link to NCBI Protein BLAST