Transcript Information: S_Transcript_114355.p3


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8273533044649
Replicate 28.3636718584043
Replicate 36.1475786945335
Condition 2: 8 Hour
Replicate 18.641661435701
Replicate 29.0657164422422
Replicate 39.3343907812663
Condition 3: 24 Hour
Replicate 16.2821887162493
Replicate 27.1102153965011
Replicate 35.2751988298282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114355.p3 GENE.S_Transcript_114355~~S_Transcript_114355.p3 ORF type:complete len:153 (+),score=22.94,zf-RVT|PF13966.2|5.8e-13,zf-RVT|PF13966.2|2.3e+03 S_Transcript_114355:5415-5873(+)
ATGCCTAAGCACTCCATCATGGCTGTCATGGCCATCTCTGAAGGGCTTCCTACTCAAGATAATTATGCAAAGAGGGGCTTGCCTATAGTCAGCAGGTGTAGTATTTGTTGTAACAGCCAAGAGACTACCAGCCATCTTTTCTTTAAGTATGACTATGCAGCAGAAGTTTGGAAAGGTGTTCTTTGCTGGATTGGCATTCGCAGAAGGGGATTGAGCTTCAAGGGGGAACTTAAATGGTTTAGCAAATATATCAGAGGTAAGAGTTGGGAGAAGAAGATGAAAAGATGTGCATTAGTAACAACTGTATATGAACTTTGGCATGAAAGAAATCGGAGGATCTTCCAAAGTCAGGAGCAAACTGTGAGCAGGCTCATTCATCAGATTAAATTTTTTGTCTCAGCTAGAATGCTGCTTGTAGATGGAGCTACCTATGAGAACAAGACTAGTCTACTCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114355.p3 GENE.S_Transcript_114355~~S_Transcript_114355.p3 ORF type:complete len:153 (+),score=22.94,zf-RVT|PF13966.2|5.8e-13,zf-RVT|PF13966.2|2.3e+03 S_Transcript_114355:5415-5873(+)
MPKHSIMAVMAISEGLPTQDNYAKRGLPIVSRCSICCNSQETTSHLFFKYDYAAEVWKGVLCWIGIRRRGLSFKGELKWFSKYIRGKSWEKKMKRCALVTTVYELWHERNRRIFQSQEQTVSRLIHQIKFFVSARMLLVDGATYENKTSLLL*

Click here to download the sequence:
Link to NCBI Protein BLAST