Transcript Information: S_Transcript_114377.p1


Annotated TAIR IDAT1G13410.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4601526-4603174 | Forward length=474
E-Value1.9E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9297702758491
Replicate 24.1651247575869
Replicate 34.2401056790334
Condition 2: 8 Hour
Replicate 15.6601970561362
Replicate 26.1888478479991
Replicate 35.1397090486777
Condition 3: 24 Hour
Replicate 14.981450067014
Replicate 23.5584302288097
Replicate 34.4786807822169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114377.p1 GENE.S_Transcript_114377~~S_Transcript_114377.p1 ORF type:complete len:535 (+),score=97.77,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.024,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|83,PPR_2|PF13041.2|11,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00026,PPR|PF01535.16|5e-05,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|0.018,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.00053,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|1.7,PPR|PF01535.16|0.018,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.0065,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.00073,PPR_1|PF12854.3|0.0094,PPR_1|PF12854.3|17,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.015,PPR_3|PF13812.2|0.0098,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|32,PPR_3|PF13812.2|0.93,PPR_3|PF13812.2|7.7e+03 S_Transcript_114377:250-1854(+)
ATGAAATATGCCAGTTGTCTCTTTGATCATATGCAAGACCCAAATGATGTAACTTACAATGTGATGTTTAAAGGGTACAGTCAAAATGGCCAATATGGTGAAGTGATTACCTTGTTTAGGAGAATGATGAGACTTGAAGTTAAGCCTAGCTGTTATACCTTCCCCATGGTTTTGAAAGCTTGTGGGAACTTGTCGGCGTTATCTGAGGGTCGGCAAGTGCACTCTTTTGTGATTAGAAATGGGTATAGAAGCAACCACTTTGTTGGTAATACATTGATTGAGATGTATTCAGGTGGGGGTGAAAGTGGGTTAGCTTATAGGGTGTTTGGTGAGATGCCTTTGAGGAATTTAGTTGCCTGGACTTCTATGATTAATGGGTTTATTTTGTGTGGCCGTATAGAGTCGGCCAAGAGTCTTTTTGACTTGGCTCCGGAGAGAGATGTTGTGTTATGGAATACCATGGTGTCGGGTTATATTGAAATTGGAGATATGGCAACTGCACGTAAGCTCTTTTATGAGATGCCAAGTAAGGATATAATGTCTTGGAATACTATGCTTGGTGGTTATGCAAACAAGGGGTATCTTGAGGCTTGTGAGAAATTGTTTCACGAGATGCCGAAAAGGAATGTTTTCTCTTGGAATGGACTTATTGGTGCATATTCACGTCATGCGCATTTTTCTGAAGTTGTGACTACTTTTAAGCAAATGCTGATTGACTCCAGTATACTTCCTAATGATGCTACACTGGTTACTGTGTTGTCAGCATGTGCTAGATTGGGAGCACTTGACATGGGGAAGTGGTTACATATGTATGCCCAGAGTATTGGATATAAAGGAAATATCTATGTTGAAAATGCTTTGGTGGACATGTATGCGAAATGTGGGGAAATTGAAAAGGCTATCATTGTGTTCAAGGGCATGGTCAAGAAGGATCTTATATCTTGGAACACTATAATTGGTGGTCTTGCCATGCATGGTCATGCATTAGATGCCTTGGCTTTCTTTGATGAGATGAGAAATGCTGGTGTCAAACCTGATGCAGTCACCTTTATTGGTGTTCTATGTGCCTGTACCCATATGGGTTTAGTTGACAAGGGGTTGGCTTATTTTGAATCCATGGATAATTATTCTGTCAAGCCCCAGATTGAGCACTATGGTTGTGTAGTTGATTTATATGCCCGAGCAGGTCGTCTTGATGAGGCACTTAGTTTTGTGAACAAGATTCCCTTGAAAGCAGATTCTGTCATTTGGGCTTGTTTGCTAGGGGCATGTAGGGTTTACAAAAATGTTGAAATTGCTGAGCTGGCTCTGCAACAACTCATTGAGCTTGAACCAGGGAACCCATCAAACTACCTTATGCTATCAAACATTTACGGGGATGCTGGAAAATGGGAAACCGTCTCTAAGCTAAAAGTCGCCATGAGGGATACTAGATTTAGGAAAATGCCTGGGTGTAGCATGATAGAGGTTCATGATGAAGTAGCTGAGTTCTATTCGTTGGATGAAAGGCATCCTGAAACAGAGAAAATATATGTATGCTTGAGAAGCTTGACCAAGCTAATACGGTCACCGCATTGTCAGCCTGAGGCTGTGGAGCTCGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114377.p1 GENE.S_Transcript_114377~~S_Transcript_114377.p1 ORF type:complete len:535 (+),score=97.77,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.024,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|83,PPR_2|PF13041.2|11,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00026,PPR|PF01535.16|5e-05,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|0.018,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.00053,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|1.7,PPR|PF01535.16|0.018,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.0065,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.00073,PPR_1|PF12854.3|0.0094,PPR_1|PF12854.3|17,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.015,PPR_3|PF13812.2|0.0098,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|32,PPR_3|PF13812.2|0.93,PPR_3|PF13812.2|7.7e+03 S_Transcript_114377:250-1854(+)
MKYASCLFDHMQDPNDVTYNVMFKGYSQNGQYGEVITLFRRMMRLEVKPSCYTFPMVLKACGNLSALSEGRQVHSFVIRNGYRSNHFVGNTLIEMYSGGGESGLAYRVFGEMPLRNLVAWTSMINGFILCGRIESAKSLFDLAPERDVVLWNTMVSGYIEIGDMATARKLFYEMPSKDIMSWNTMLGGYANKGYLEACEKLFHEMPKRNVFSWNGLIGAYSRHAHFSEVVTTFKQMLIDSSILPNDATLVTVLSACARLGALDMGKWLHMYAQSIGYKGNIYVENALVDMYAKCGEIEKAIIVFKGMVKKDLISWNTIIGGLAMHGHALDALAFFDEMRNAGVKPDAVTFIGVLCACTHMGLVDKGLAYFESMDNYSVKPQIEHYGCVVDLYARAGRLDEALSFVNKIPLKADSVIWACLLGACRVYKNVEIAELALQQLIELEPGNPSNYLMLSNIYGDAGKWETVSKLKVAMRDTRFRKMPGCSMIEVHDEVAEFYSLDERHPETEKIYVCLRSLTKLIRSPHCQPEAVELE*

Click here to download the sequence:
Link to NCBI Protein BLAST