Transcript Information: S_Transcript_11441.p1


Annotated TAIR IDAT5G38600.1
Annotated Gene NameProline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15457386-15460466 | Forward length=532
E-Value9.1E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.131705773027
Replicate 218.558489109157
Replicate 315.782438658251
Condition 2: 8 Hour
Replicate 121.394516379749
Replicate 221.392853642526
Replicate 319.795754744983
Condition 3: 24 Hour
Replicate 118.623028713213
Replicate 217.778419453731
Replicate 316.065256809093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11441.p1 GENE.S_Transcript_11441~~S_Transcript_11441.p1 ORF type:complete len:617 (+),score=149.18,PSP|PF04046.12|2.7e-10 S_Transcript_11441:305-2155(+)
ATGGAAACAGAAAAAACAATTCAACTACCAACTTGTGGTTCTGATAGTGGAAGTGATAGAGATGAAGCTCATAAGTTGAATCACGAAGTTCATGAGGCTGAGGTTGAAGATCATATGGCTAAGAGTGAAAATCAATGGCAAATTGTGGATCATGCTGAAATGGAAGAAGGCCAGCTTATTCAGGAGACAGAAATTTCTGGAGATGTTATAGGTGATTCATCGGATTTGCATGAGAGGGTTGATTTTGTTGGAACTTCTGAAACTCAAGTCCTGGATAATGGAGCTTTATGCGCTGAGACTGGTTGCTTGGATAGTAATAACGTTGAAGAAGGGCAACTCGTTCCTGAGACAGCCACCATTGTCAATGCTGTTGTTGAGAGTGTCAATTTTACTGGAGCTAGTACAAAAATTGAAGGGAATAATGCTTCTCTCAATAAGGTTGAATTTGCTGAAACTGTTACAGAAATTGATGGGAAGTGTGTTGACATGCCTTATGAGGATGGTTCCGTGAGCTATGCTAAGATAGATGGTGATTCTATATCGGGTGTTAAGAGAACACGAACTACATTTGATGAGCAGCAGCAATCTGTGCATGTCAAGTATAGTGGCTTGTCAAGACAAAGTAAACGAAAGCTTGAGGAGCTAATGCGGGAGTGGTCAAAATGGACTGCGCAAAACTGTTTCTCAGCGCAAGATCAGAATGAAGTATCTGAATCTGGTGAAGAGATATACTTTCCAGCTCTAGATATTGGCATGGGAAAGACTTCTGCAGTGTCTTTCTGGGTGGAGAATGAAATAACAAAGCCACAGAACAAGGATTTTGTCCCTGTAGAAGATGATTCTGTACCCCTTTATGATCGTGGATTTGCCTTGGTATTGACTTCAGCTGATGGATCAAGTAATCTTGAGGGGGGTTTGGAAGTAATGGATGCCCCGCGTTGTTTCAATTGTGGTTCGTACAGCCATTCTTTAAAGGAATGCCCAAAGCCTCGCGACAATGCTGCTGTTAATTTTTCTCGCAAACAGCTCAAATCAAAACGTAATCAAACAGCTGGTTCACGTAATCCCACCAGATATTATCAGGAGTCTCCCGGGGGAAAGTATGAAGGACTGAAGGCCGGTGTCCTTGATGCAGAAACAAGGCGACTTTTGAGTCTTGGGGACTTTGATCCACCTCCATGGCTTCATAGGATGCGAGAAATTGGTTATCCTCCTGGATATCTGGAGCCCGAAGATGAGGATCTGCCTTCTGGAATTACATTATATGGTGACGAGGAAATTAAAGAGGACAAGGAAGAAGGAGAAATTCTTGAAGCAGATCTTGTTGAACCAGGAAAGAAAATGACAGTGAAGTTTCCCGGCATAAATGCACCAATCCCTCAGAACGGTGATGAAAGAATTTGGGCGACTAGACCTTCGAATTCAGACCGTCATCGAAATGGAGATGGTGGGCGCTCGAATTATTCTTCAGACTCTAACAGTAGAGGACGTTTTCGAGAGTATAACCACCGTGATTTCAATGACGATGACCCACTTGGCTTTGATCGAGCTCCAAGATATCCACGAAGGTATAATGATTATGACCTAAATTCCACATCTCGCAGTTTGAGAGAGAATGCTCCCAGACCAAGAAGTCCTACTTCTGGAAGGTTGGGTGATAGAGCGAGAAATGATCCTTTGGATTCCGAAGATTCTGTAGCTTACAGTTTATATAGCTCCTTTTCATATTCCTCTAATAGGCGGGTTTCAGAGTTTGGGAATGGTTCGGATGTTGGCAGAGGTGATCGCCCCGACTATTCATCAAGAAGTAGGGATAGAGAAGATAGGCATCGTCCCCGTAGTGGGCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11441.p1 GENE.S_Transcript_11441~~S_Transcript_11441.p1 ORF type:complete len:617 (+),score=149.18,PSP|PF04046.12|2.7e-10 S_Transcript_11441:305-2155(+)
METEKTIQLPTCGSDSGSDRDEAHKLNHEVHEAEVEDHMAKSENQWQIVDHAEMEEGQLIQETEISGDVIGDSSDLHERVDFVGTSETQVLDNGALCAETGCLDSNNVEEGQLVPETATIVNAVVESVNFTGASTKIEGNNASLNKVEFAETVTEIDGKCVDMPYEDGSVSYAKIDGDSISGVKRTRTTFDEQQQSVHVKYSGLSRQSKRKLEELMREWSKWTAQNCFSAQDQNEVSESGEEIYFPALDIGMGKTSAVSFWVENEITKPQNKDFVPVEDDSVPLYDRGFALVLTSADGSSNLEGGLEVMDAPRCFNCGSYSHSLKECPKPRDNAAVNFSRKQLKSKRNQTAGSRNPTRYYQESPGGKYEGLKAGVLDAETRRLLSLGDFDPPPWLHRMREIGYPPGYLEPEDEDLPSGITLYGDEEIKEDKEEGEILEADLVEPGKKMTVKFPGINAPIPQNGDERIWATRPSNSDRHRNGDGGRSNYSSDSNSRGRFREYNHRDFNDDDPLGFDRAPRYPRRYNDYDLNSTSRSLRENAPRPRSPTSGRLGDRARNDPLDSEDSVAYSLYSSFSYSSNRRVSEFGNGSDVGRGDRPDYSSRSRDREDRHRPRSGR*

Click here to download the sequence:
Link to NCBI Protein BLAST