Transcript Information: S_Transcript_114449.p1


Annotated TAIR IDAT5G58900.1
Annotated Gene NameHomeodomain-like transcriptional regulator
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23783275-23784667 | Reverse length=288
E-Value5.6E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.344644757305
Replicate 212.162819884271
Replicate 39.1031453745977
Condition 2: 8 Hour
Replicate 19.6374360087043
Replicate 28.1743293106693
Replicate 39.5648034124916
Condition 3: 24 Hour
Replicate 19.3820973966013
Replicate 29.5885356669162
Replicate 39.3774267660047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114449.p1 GENE.S_Transcript_114449~~S_Transcript_114449.p1 ORF type:complete len:312 (+),score=74.89,Myb_DNA-binding|PF00249.27|4.2e-06,Myb_DNA-binding|PF00249.27|7.3e-13,Myb_DNA-bind_6|PF13921.2|0.33,Myb_DNA-bind_6|PF13921.2|2.3e-05 S_Transcript_114449:957-1892(+)
ATGAAGTGGGAGATGGAAGTGCTATCATCATACCTGTCAAATGCAAGCTGGTTAATTGATGAGAGTAGGAGCACAAAATGGACTCAAGCTGAGAACAAGATGTTTGAAAATGCACTTGCTGTTTATGATAAAGATACCCCAGATCGGTGGCATAAAGTGGCAGCTATGATTCCAGGAAAGACAGTTGGTGATGTGATCAAACAATACAAGGAATTAGAAGATGATGTTAGTAATATTGAAGCTGGGTTAGTCCCGATTCCTGGCTATGATACCACCTCTGCTTTCACATTGGAATGGGTTAACCACAATGGTTATGATGGCTATAAGCACACTTACAGCCCTGGTGGCAAGCGCGGGCCCGGCGCTCGGCACCCGGATCAGGAAAGGAAGAAGGGGGTTCCTTGGACTGAAGAGGAGCACAAGTTGTTCTTGATGGGTTTGAAGAAATATGGAAAAGGGGATTGGAGAAACATATCAAGGAATTTTGTGGTAACAAGAACACCAACCCAAGTGGCTAGCCATGCACAAAAATACTTCATAAGGCAACTATCAGGTGGAAAAGATAAGAGAAGAGCTAGCATTCATGATATAACAACTGTCAATCTAGAGAATGAAGCTCTTTCACCAGACAATAACAGCAGCAACAAGCAATCAACTTCTCCAGAGCACTCAACAATTACAGTGCAAACCCAACAACAGTCTGTGATGCCAAAAACACATTTTCAGTGGGATCAATCAAACAATGGAGGAGGAACAACAGGCATTGCTTTTGATTCAATGCAAGGAAATTTGTTCATGTCAACATATGGGGTTGGCTCTTATGGGTTTAAATTGCAGGGTCAGAATTTGCAGAGGAGCGATTTTTTAGATAACTACATTGGATCTCAAAACTTGGGTTTCCAGATTCAATCAACACAGCACCATCCTCATGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114449.p1 GENE.S_Transcript_114449~~S_Transcript_114449.p1 ORF type:complete len:312 (+),score=74.89,Myb_DNA-binding|PF00249.27|4.2e-06,Myb_DNA-binding|PF00249.27|7.3e-13,Myb_DNA-bind_6|PF13921.2|0.33,Myb_DNA-bind_6|PF13921.2|2.3e-05 S_Transcript_114449:957-1892(+)
MKWEMEVLSSYLSNASWLIDESRSTKWTQAENKMFENALAVYDKDTPDRWHKVAAMIPGKTVGDVIKQYKELEDDVSNIEAGLVPIPGYDTTSAFTLEWVNHNGYDGYKHTYSPGGKRGPGARHPDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLENEALSPDNNSSNKQSTSPEHSTITVQTQQQSVMPKTHFQWDQSNNGGGTTGIAFDSMQGNLFMSTYGVGSYGFKLQGQNLQRSDFLDNYIGSQNLGFQIQSTQHHPHG*

Click here to download the sequence:
Link to NCBI Protein BLAST