Transcript Information: S_Transcript_11458.p1


Annotated TAIR IDAT4G24690.1
Annotated Gene Nameubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12741191-12744202 | Forward length=704
E-Value6.5E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.936875600435
Replicate 213.023174391589
Replicate 311.953625239371
Condition 2: 8 Hour
Replicate 119.054631162994
Replicate 216.157446239802
Replicate 316.529650341826
Condition 3: 24 Hour
Replicate 114.436838510566
Replicate 212.695931484898
Replicate 310.91787570314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11458.p1 GENE.S_Transcript_11458~~S_Transcript_11458.p1 ORF type:complete len:864 (+),score=200.84,N_BRCA1_IG|PF16158.1|1.4e-30,PB1|PF00564.20|1.1e-10,ZZ|PF00569.13|1.2e-07 S_Transcript_11458:129-2720(+)
ATGGCTTCGTCTGTTGTCATCAAGGTGAAGCATGGAGACACACTTAGGCGGTTCAATACTGTCATTACAAGAGATAACAACTTGGATCTTAATATGGACGAACTGAGAATGAAGGTTCGCTCTCTTTTCAATTTCCCTGCTGATGCTAATTTTACTTTGACCTATATTGATGAGGATAATGATCGGGTGACACTGGCGGATGATGATGATTTAAGTGATGTTTTGAGGCAAAGCTTGAATCCTGTCAGGATCACTGTTCATCTCAATACAGAGAAGAGTGTTCCATCTTCTGCTTCCAGTATAAGCTCAGGTCCTAGCAGCTCCTCTCCACAGATTCTGGATCAAAATTTGAATTGTAATATTTCTGAAGTTCTGAAATCTGTGCCAGAGCCTCTCCGTGACGCTGTGTCTAGGCTGTCTCTTGAAGTAGCAGCTAAAGCTGCATCCACTTCTCCCAAATTGGCCGATATTGTTGAGAGTTTAGCAAAATTTGGGCAGTCTTGCTTAAATGTCTCCAAGTCTTCATCCAATCCTGGTGCTAGGACAAACCATCATGATGAAGTTTGTGATAACCGTGAGCACACTTCAGTAGGGGAGAAACTTAATACCACTTCTAATGGATTGGAGTCAAATAACAGTGGTTTTCGACAGCCTGCTTCTGAAAGCACCCAAATTCCAGATGTAGTTGGAGCTGTAAAAGGAGTAGAACCTAGTAGACCTCCATTTCTTCCTTCCTTTACGGGACATGAAGGCAGGGGTGCAAAAATTGACGATTGTGCTGCAAAATCATGGGCCAATCAAAAAGCTAACCTTCTCAAAAATCAATTACCTAAGGGACACTGGGAGAAGAAGCTTCGCAATGCTCAACCAGAAGTTGCACCTTGTGGTGTGAGATCTCGTCCCATCATGGAGCTTAAGGCTTGCCATCCTGAACCGTCTGCAAACATTCCCCAATGCGGTGGAAACAAATGTGCTTCAATTTATAGTTTAGGTGATTGTCCCTTTACAGCGCTTCCACTACCGCCAAGGCATGACGAGGGGATCTATGTAGATCCTGTTCAGGCTTTCCATGACAGCTATAGCAAGGATGATGGTATGGGTTCCATTTTCCACAGAGGTGTCCGCTGTGACGGCTGTGGGGTTCTTCCAATTACTGGGTCACGGTTCAAGTCTAAAGTAAAGCATGATTTTGATCTGTGCAGTATTTGCTTTGCACGAATGGGAAATGATGCAGATTACACTAGAATTGATTTCCCCATGCCATACAGGCATCCATGGTCGACTTACGCTTTCCATGATTCTAGGGGTGGTCACCTCAATCATATGAAATTTCCACATATTATGAGACCATATGGGCCGAAGCATCTCCGCTCTAGACTTGACAGTCGGTTCATAATGGATGTTAATGTCATGGATGGTACAATAATGTTTCCATCTACCCCCTTTACCAAGATCTGGCGTATGCGCAACAATGGTATCCTTTCGTGGTCCCGTGGATTACAACTTCATTATATAGGAGGAGATCGATTTAGCGCTTCTGATTCAGTTGAGATTGAGATTCCACTGGAAGGGGTAAATGTTGGCAAGGAACTTGATGTATCTGTCGACTTTGTTGCTCCTGAATTGCCTGGAAGATACATCTCATATTGGAGGATGGCAGATCCATCTGGACATAAGTTTGGGCAGCGTGTGTGGGTTCTAATCCAGGTTGATGCTACTCTGAGTGACTCCACATGTGAAAGCTTCCCCACTTTGAACTTGAATGTGCCACCTGAAGGTACTGGGGTGCATCCAGTTCTAGATGTGAATGTTAAGTCGTCACTAGATGCTGAAGCCGGTGACCCCAATTCTGCTTCTGATGTTGACAAGTCCTCGGCTGCTAAGCAAAACCGTAGAGTTGAGATTGAAGACCTCAATTTTCCAATTAATGATGACTTATTGGTTGCTAATGATGTGTCATGTGCCGCATCTACGACAGCGTCGTCATCAGTCTCGCCTCCTGCTGGTGTTGAAAACCCACCTGTCACTCTTTCAGCATCATTCTTATCTCATATTGCTGCTACTGCTGAAAAGCCGGTGTGTCTTCTTCCATCTTCAGTCTCACCTCATATTGGTGCCGAGAGCCCAATGTCTTCCATAGTATCTACTGTTCCAATCCCTCCAGTCACATTTTCCTCATACCCTGCTGTTGATATTGATGTCCCCTGCAAACCGATATCTGCCCCAACGACTTTATACCCTCATGTCAATATGCCCATCGAAACATCTTCCTCATCTTCTAACAGCAAGGAAGATCAAAAGAGCCTAGAGCAAGACAAAGCAAAAATTGAAGTCGATGAGAGCATGCTGAAGGAATTCGAGGATATGGGATTTAAGCAAGCTGAACTGAACAGGGAGATTTTGCGGATGAATGAGTATGATATGGAGCGATCTGTGGATGATCTCTGTGGTGTTTCTGGGTGGGATCCAATCCTCGAGGAGCTGAAGGAGATGGGTTTCCATGACAAAGAGACAAATCAGAAGCTGCTCGTGAAGAACAATGGAAGCATCATGCGTGTGGTTATGGATCTTATTGCTGGGGACAAGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11458.p1 GENE.S_Transcript_11458~~S_Transcript_11458.p1 ORF type:complete len:864 (+),score=200.84,N_BRCA1_IG|PF16158.1|1.4e-30,PB1|PF00564.20|1.1e-10,ZZ|PF00569.13|1.2e-07 S_Transcript_11458:129-2720(+)
MASSVVIKVKHGDTLRRFNTVITRDNNLDLNMDELRMKVRSLFNFPADANFTLTYIDEDNDRVTLADDDDLSDVLRQSLNPVRITVHLNTEKSVPSSASSISSGPSSSSPQILDQNLNCNISEVLKSVPEPLRDAVSRLSLEVAAKAASTSPKLADIVESLAKFGQSCLNVSKSSSNPGARTNHHDEVCDNREHTSVGEKLNTTSNGLESNNSGFRQPASESTQIPDVVGAVKGVEPSRPPFLPSFTGHEGRGAKIDDCAAKSWANQKANLLKNQLPKGHWEKKLRNAQPEVAPCGVRSRPIMELKACHPEPSANIPQCGGNKCASIYSLGDCPFTALPLPPRHDEGIYVDPVQAFHDSYSKDDGMGSIFHRGVRCDGCGVLPITGSRFKSKVKHDFDLCSICFARMGNDADYTRIDFPMPYRHPWSTYAFHDSRGGHLNHMKFPHIMRPYGPKHLRSRLDSRFIMDVNVMDGTIMFPSTPFTKIWRMRNNGILSWSRGLQLHYIGGDRFSASDSVEIEIPLEGVNVGKELDVSVDFVAPELPGRYISYWRMADPSGHKFGQRVWVLIQVDATLSDSTCESFPTLNLNVPPEGTGVHPVLDVNVKSSLDAEAGDPNSASDVDKSSAAKQNRRVEIEDLNFPINDDLLVANDVSCAASTTASSSVSPPAGVENPPVTLSASFLSHIAATAEKPVCLLPSSVSPHIGAESPMSSIVSTVPIPPVTFSSYPAVDIDVPCKPISAPTTLYPHVNMPIETSSSSSNSKEDQKSLEQDKAKIEVDESMLKEFEDMGFKQAELNREILRMNEYDMERSVDDLCGVSGWDPILEELKEMGFHDKETNQKLLVKNNGSIMRVVMDLIAGDKA*

Click here to download the sequence:
Link to NCBI Protein BLAST