Transcript Information: S_Transcript_11488.p1


Annotated TAIR IDAT5G42740.1
Annotated Gene NameSugar isomerase (SIS) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17136080-17140622 | Forward length=560
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.398270156806
Replicate 237.584155544468
Replicate 340.347529642544
Condition 2: 8 Hour
Replicate 154.922233307985
Replicate 255.223142168588
Replicate 354.748071743321
Condition 3: 24 Hour
Replicate 141.773549131136
Replicate 240.476772253898
Replicate 346.904152753374


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11488.p1 GENE.S_Transcript_11488~~S_Transcript_11488.p1 ORF type:complete len:570 (+),score=127.59,PGI|PF00342.15|1.6e-216 S_Transcript_11488:278-1987(+)
ATGGCATCATTATCCACACTGATATGTGACACAGATGCATGGCGCGACCTAAAGACCCATGTTGAGGATATTAAGAAAACCCATTTGCGTGATTTGATGAATGATGCTGACAGATGCAAGTCCATGATGGTTGATTTTGAAGGTATGCTGTTGGATTATTCAAGGCAAAATGCAACTCTTGAGACCATGAATAAGTTGTTTAAGCTGGCTGAGGCTGCCAAGCTCAAAGAAAAGATTAACCGAATGTATAATGGTGAACGTATTAATAGCACCGAGAATAGGTCTGTTCTTCATGTTGCTCTCCGTGCAGCAAGAGATGCTGTCATAAACAGTGATGGGAGAAATGTGGTCCCTGAGGTGTGGGGCGTTCTTGACAAGATACGGGATTTCTCCGAGAAAGTTCGAAGTGGTTCCTGGATTGGAGTCACTGGGAAAGCTTTGAAGGATGTCATTGCAATTGGTATTGGGGGCAGTTTCTCAGGACAGTTGTTTGTGCACACAGCTCTCCAGACAGAACCTGAGGCTGCTGCATGTGCAAGAGGACGCCAACTACGCTTCCTGGCAAATGTTGATCCAATTGATGTTGCAAGAAATATCTCAGGATTGAACCCTGAGACTACTCTAGTTGTTGTTGTATCAAAAACTTTTACAACAGCTGAAACCATGTTGAATGCTCGGACGTTGAGGGAATGGATTTCATCTGCTCTGGGTCCTGCAGCGGTTGCCAAGCACATGGTGGCTGTTAGCACTAATCTTACGCTGGTGGAAAAGTTTGGTATTGACTCTAATAATGCTTTCGCATTCTGGGATTGGGTTGGAGGTAGATATAGTGTATGCAGTGCAGTTGGGGTTTTGCCTTTATCTCTTCAATATGGATATCCCATTGTTGAGAAGTTTCTAAGGGGAGCTTCAAGTATTGATCAACATTTCTACTCAGCACCGTTTGAGAGAAATTTGCCGGTGCTTTTAGGTTTGTTGAGCATTTGGAATGTTTCATTTCTTGGACTTCCAGCAAGAGCTATTCTACCCTATTGCCAATCACTAGAAAAATTCGCTCCTCACATTCAACAGGTTAGCATGGAAAGTAATGGGAAGGGTGTCTCAATTGATGGTGTGCCCCTTCCTTTTGATGCTGGTGAAATTGACTTTGGTGAACCAGGGACAAACGGGCAACATAGCTTTTACCAGCTTATTCACCAGGGCCGTGTTATTCCCTGTGATTTTATTGGAATTGCAAAAAGTCAGCAACCTGTGTATCTCAAAGGAGAAGTAGTAAGTAATCATGATGAGCTTATGTCCAACTTCTTTGCACAACCAGATGCCCTAGCCTATGGGAAGACTCAAGAGGAGTTGCAGAAGGAGAATGTATCTCCACATCTTATCCCACACAAGACTTTCACTGGCAACCGTCCTTCTTTGAGCCTTCTACTTCCATCCCTGACTGCTTATAATGTTGGACAGTTGCTTGCAATCTATGAACATAGAATTGCTGTTGAGGGTTTCATTTGGGGTATCAACTCTTTCGATCAGTGGGGAGTTGAACTAGGGAAGTCACTAGCGAATCAAGTGAGGAAACAGCTTAATGCTTCTCGTACAAAAGGAGGAACTATCGAAGGATTCAATTTCAGTACTGCAACAATGCTATCAAAATTTTTACAGGAGAGCTCTGATGTCCCAGCTGAACTTCCCACCAAGTTGCCACAGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11488.p1 GENE.S_Transcript_11488~~S_Transcript_11488.p1 ORF type:complete len:570 (+),score=127.59,PGI|PF00342.15|1.6e-216 S_Transcript_11488:278-1987(+)
MASLSTLICDTDAWRDLKTHVEDIKKTHLRDLMNDADRCKSMMVDFEGMLLDYSRQNATLETMNKLFKLAEAAKLKEKINRMYNGERINSTENRSVLHVALRAARDAVINSDGRNVVPEVWGVLDKIRDFSEKVRSGSWIGVTGKALKDVIAIGIGGSFSGQLFVHTALQTEPEAAACARGRQLRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETMLNARTLREWISSALGPAAVAKHMVAVSTNLTLVEKFGIDSNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGYPIVEKFLRGASSIDQHFYSAPFERNLPVLLGLLSIWNVSFLGLPARAILPYCQSLEKFAPHIQQVSMESNGKGVSIDGVPLPFDAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIAKSQQPVYLKGEVVSNHDELMSNFFAQPDALAYGKTQEELQKENVSPHLIPHKTFTGNRPSLSLLLPSLTAYNVGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLANQVRKQLNASRTKGGTIEGFNFSTATMLSKFLQESSDVPAELPTKLPQM*

Click here to download the sequence:
Link to NCBI Protein BLAST