Transcript Information: S_Transcript_114994.p1


Annotated TAIR IDAT3G63140.1
Annotated Gene Namechloroplast stem-loop binding protein of 41 kDa
Annotated Gene Symbol(s)CSP41A
Annotation TypeOrtholog
Chromosome Positionchr3:23327006-23328620 | Reverse length=406
E-Value4.3E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1526.4830561428
Replicate 2555.3365566672
Replicate 3643.74145388392
Condition 2: 8 Hour
Replicate 1569.17986887899
Replicate 2590.28941118186
Replicate 3576.77564226747
Condition 3: 24 Hour
Replicate 1577.87708863167
Replicate 2662.00440838619
Replicate 3676.9965821422


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_114994.p1 GENE.S_Transcript_114994~~S_Transcript_114994.p1 ORF type:complete len:410 (+),score=109.43,Epimerase|PF01370.17|6.6,Epimerase|PF01370.17|5.8e-06 S_Transcript_114994:205-1434(+)
ATGGCAACTCTTGTTGCAGCATTATCATCTTCCCTCATTTCTTCTTCAATCAACTCAATCTCTATCAACAACACTTCCCCTTCATTCCCACCATTGTCATCCTCATCTTCGAGCTTCGCTTCCTCGAGCTCTTCCTTCTTATCTCCTCTGAATCCCTTACAACTGTCTAACCGCGCTTCTGTTTTCCCTTTGAGCAGCAGGAACAACAGCACTTGCAACTTCAGTATCAATGCAAGTGGTGCAGATAAGAAGAAGGTGCTCATTGTTAACACTAACAGTGGAGGGCATGCTGTGATTGGTTTCTACTTTGCAAAAGAGCTTTTGGGTTCTGGTCATCAAGTTACTATCTTCACTGTTGGGGATGAGAGTTCTGACAAGATGAAGAAACCCCCTTTTAACAGATTCAATGAAATTGTGAGTGCTGGTGGCAAGACAGCATGGGGAAATCCTGCGGAAATAGGATCAGTAGTTGGAGGAGAAGCATTTGATGTTGTGCTGGACAACAATGGCAAGGATCTCGAAACTGTCAAGCCTGTGATAGATTGGGCAAAGAGCTCCGGTGTGGGACAATTTCTGTTCATCAGCAGTGCAGGAATCTATAAGCCTACTGATGAACCACCTCATGTTGAAGGAGATGTTGTTAAAGCTGATGCTTCTCATGTTGGAATAGAAGAATACATGGCCGAGACTTTCAGTAGCTGGGCAATCTTCCGCCCTCAGTATATGATTGGTTCAGGAAACAACAAAGACTGTGAAGAATGGTTCTTTGACAGAATTGTTCGAGACAGGCCAGTTCCTATCCCTGGCTCCGGAATGCAGCTCACAAACATCAGTCATGTAAGGGACTTGTCATCCATGCTTACAGCAGCAGTCGAGAACCCAACCGCAGCAAGTGGAAACATCTTCAACTGTGTCACTGACCGAGCTGTGACCCTCGATGGAATGGCCAAGCTCTGTGCTCAAGCTGCTGGTCGCCCAGTCAAGATCGTGCACTATGAGCCAAAGGCTGTTGGTGTTGACGCAAAGAAGGCTTTTCCTTTCCGCAACATGCACTTTTACGCAGAGCCACGAGCAGCTAAGGAGCTTCTAGGATGGCAAGCTACCACAAACCTTCCTGAAGACCTGAAGGAGAGATATGAGGAGTACGTAAAGATTGGAAGAGACAAAAAGGATATAAAGTTTGAACTAGATGATAAGGTACTAGAAGCACTCAAGGTGCCAGTGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_114994.p1 GENE.S_Transcript_114994~~S_Transcript_114994.p1 ORF type:complete len:410 (+),score=109.43,Epimerase|PF01370.17|6.6,Epimerase|PF01370.17|5.8e-06 S_Transcript_114994:205-1434(+)
MATLVAALSSSLISSSINSISINNTSPSFPPLSSSSSSFASSSSSFLSPLNPLQLSNRASVFPLSSRNNSTCNFSINASGADKKKVLIVNTNSGGHAVIGFYFAKELLGSGHQVTIFTVGDESSDKMKKPPFNRFNEIVSAGGKTAWGNPAEIGSVVGGEAFDVVLDNNGKDLETVKPVIDWAKSSGVGQFLFISSAGIYKPTDEPPHVEGDVVKADASHVGIEEYMAETFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNISHVRDLSSMLTAAVENPTAASGNIFNCVTDRAVTLDGMAKLCAQAAGRPVKIVHYEPKAVGVDAKKAFPFRNMHFYAEPRAAKELLGWQATTNLPEDLKERYEEYVKIGRDKKDIKFELDDKVLEALKVPVA*

Click here to download the sequence:
Link to NCBI Protein BLAST