Transcript Information: S_Transcript_115005.p1


Annotated TAIR IDAT2G05100.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.1
Annotated Gene Symbol(s)LHCB2.1, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1823449-1824331 | Reverse length=265
E-Value3.9E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34788236908733
Replicate 20.72100619469003
Replicate 30.12054075871634
Condition 2: 8 Hour
Replicate 10.27876327211939
Replicate 20
Replicate 30.13931926539204
Condition 3: 24 Hour
Replicate 10
Replicate 21.1850358994169
Replicate 30.65939985372853


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115005.p1 GENE.S_Transcript_115005~~S_Transcript_115005.p1 ORF type:internal len:153 (+),score=-23.09,Chloroa_b-bind|PF00504.17|3.7e-24 S_Transcript_115005:2-457(+)
GGGGACCAGAAACTCTCTTCTCGCCCCACATCTGTTGCTTTCCTCCCTTCCTCTCTCGACTTCAGTCTCAACATGTCCATGGCTTTCTCCACCACCGCTGCGCGCAAGGCCGCCGTGGCCGCGCGCCCAGCTGGCCGCACCGTCGCCACCCGCGCGGCGGTCGAGTTCTACGGCCCCGACCGCGCGAAGTGGCTCGGCCCGTACAGCGACAACGCCACGCCCTCGTACCTCAACGGCGAGTTCCCCGGTGACTACGGCTGGGACACCGCCGGCCTGTCCGCGGACCCCGAGACGTTCAAGCGCTACCGCGAGCTTGAGCTCATCCATGCCCGCTGGGCGATGCTTGGCGCGCTCGGCTGCGTGACGCCCGAGATCCTCTCCAAGTACAACGGTGTCAAGTTCGGCGAGTCCGTGTGGTTCAAGGCGGGCGCGCAGATCTTCCAGCGCGACGGCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115005.p1 GENE.S_Transcript_115005~~S_Transcript_115005.p1 ORF type:internal len:153 (+),score=-23.09,Chloroa_b-bind|PF00504.17|3.7e-24 S_Transcript_115005:2-457(+)
GDQKLSSRPTSVAFLPSSLDFSLNMSMAFSTTAARKAAVAARPAGRTVATRAAVEFYGPDRAKWLGPYSDNATPSYLNGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPEILSKYNGVKFGESVWFKAGAQIFQRDGL

Click here to download the sequence:
Link to NCBI Protein BLAST