Transcript Information: S_Transcript_115014.p1


Annotated TAIR IDAT1G55900.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)TIM50, emb1860
Annotation TypeHomolog
Chromosome Positionchr1:20903163-20905420 | Forward length=376
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.552338188362
Replicate 25.3666244869631
Replicate 34.984523265838
Condition 2: 8 Hour
Replicate 18.0690666064827
Replicate 28.0115403912534
Replicate 36.1931178852311
Condition 3: 24 Hour
Replicate 15.1660197443973
Replicate 25.9722206180915
Replicate 36.8167687581395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115014.p1 GENE.S_Transcript_115014~~S_Transcript_115014.p1 ORF type:3prime_partial len:148 (+),score=34.54 S_Transcript_115014:111-551(+)
ATGTCTCTCTCTTTACTTCGATCTCGTGTTTCTAACACCACCATCAACAACCTTTGCAGCAAAAACAAGGGCCATCTTATTATTTGCCAAAGATTATTTTGCACTAAGTTTCCTAAAGAGCCTCCATTATCCTCTGCTCTTGATTCTTCTTCCTTAAACCCTGAAAACCCTTCAACTCCTCCACCTCCTTCACCCCCAATTAAGCGAAACCCATTCATCACTGCTCTCAAATTTGGTATTGCTGGCGCTATTACTGGTGTTGCTGGTCTTGCTGGTTATGCTACTCATGCATATACATTGGAAGAAGTAGACGAGAAGACAAAGGCCTTCCGAGCTTATGCAAATTACTCCACAGAAGATGATGAATCTGCTATTAATAAAACCCTATCTACTATGCGATATGGTGTTCTCACAGTGCCAGCCAAAGCAATTGAACTTTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115014.p1 GENE.S_Transcript_115014~~S_Transcript_115014.p1 ORF type:3prime_partial len:148 (+),score=34.54 S_Transcript_115014:111-551(+)
MSLSLLRSRVSNTTINNLCSKNKGHLIICQRLFCTKFPKEPPLSSALDSSSLNPENPSTPPPPSPPIKRNPFITALKFGIAGAITGVAGLAGYATHAYTLEEVDEKTKAFRAYANYSTEDDESAINKTLSTMRYGVLTVPAKAIELY

Click here to download the sequence:
Link to NCBI Protein BLAST