Transcript Information: S_Transcript_115016.p1


Annotated TAIR IDAT3G48900.2
Annotated Gene Namesingle-stranded DNA endonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18131854-18136239 | Forward length=600
E-Value1.2E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3460496956633
Replicate 23.0389517296852
Replicate 32.6419346455847
Condition 2: 8 Hour
Replicate 11.7624289518292
Replicate 21.8797283292332
Replicate 32.5250177603697
Condition 3: 24 Hour
Replicate 13.1894733471116
Replicate 22.8095634185555
Replicate 33.3351463676187


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115016.p1 GENE.S_Transcript_115016~~S_Transcript_115016.p1 ORF type:complete len:726 (+),score=150.52,XPG_I|PF00867.14|1.9e-19,XPG_I|PF00867.14|4.1e+03,XPG_N|PF00752.13|5.7e-13 S_Transcript_115016:141-2318(+)
ATGGGGGTGAAAAATTTATGGGATATTTTGGAGTCTTGCAAGAAAACCTTGCCACTTCATCACCTCCAGAATAAGAGGGTGTGCATAGACCTGTCATGTTGGATGGTTCAGCTCCAAAAAGTGAATAAATCTTACTGTGCCGCCAAAGAGAAGGTTTACCTTAGGGGTCTCTTTCACCGTCTCCGGGCTCTTATTGCTCTCAATTGTAGTCTTATCTTTGTAACTGATGGAGCAATTCCTGCTGTCAAAATTTCTACATACAGAAAGAGGTTAAATACTGCCCATGAGGATGCAGGAGATGATGCAGAGAGAGACAAGATTTCTTCCCTTCGAAGAAATAAGGGCTCTGAGTTCTCTTGTATGATCAAAGAGGCAAAAACCTTAGGCAGGGCACTTGGCATTCCTTGCTTAGATGGGATTGAGGAAGCTGAAGCACAATGTGCGCTATTGAACTCGGAATCAATATGTGATGGATGTTTCAGTTCAGATTCAGATGTTTTCCTTTTTGGTGCAAGGACTGTGTACAGAGATATTTGCCTTGAAAAGGGAGGTTATGTTGTTTGCTATGAAATGGGAGACATAGAGCATAAACTTGGACTTGGAAGAAATTCATTGATTGCCCTAGCCCTTCTTCTGGGAAGTGATTATTCTCATGGAGTCTATGGATTTGGACCTGAGTCAGCATGCCAAGTCATTAGATCAGTCGGCGAAGATGCCATTCTTCAACGCATTGCATCAGATGGTATATCTTTCTTAAAGTCGCTGAAAACCTCGAAGAAACATGGACAGTTCCCTGTGAACAACGGAAAAGAGAATAATACAGCTCCTACTGGAAAGGCTACTGGGAATGAATTGTTACGGGTTGTGGATGCATATATGAAGCCTAAGTGTCATTCTGCAGACTCGGATCCTGTATATAGGGCTCTTGCTGTGCATCCTTTTCAGCATACTGAGCTTCAGCAAATATGTGCTCAGTTCTTTGAGTGGCCTCCTGAGAAAACAGATGAATATATCCTTCCAAGGATTGCGGAAAGAGATCTACGGAGATTTGCCAATTTGCGTTCATCATCATCGCAATTGGGAGTTGCACTTCCATTGCATGAGATGCCAGTTAAGTGTCCTATAGCAGAAGTTCTTAAGCACAGAAGAGTTGTAGGTAAAGAATGCTTCGAAGTGTCATGGGAAAATTTTGACGGCCTTAAAACTTCCATAGTACCAGCTGATCTTGTAGAGAGTGCTTGTCCCGAGAAAATTGAAGAATTTGAGGAAAGGAGAGCTCAGAAGAAGCAGAAAAACAAACCAAGACCTAGGAAGAAATCAGAAGACAAAGCTTCCGTGGCCAACGTTGATCAGAAACTCCAACAATTGTTACTCGATATCGAGGCTGAGGACAATGTGAGAAGCAGAAACCCGTTGTGCTCTAGTACATCTGTGTCAGGAAGCAGCATAGTCGGTTCTTTGTTCTCCAGTACATCTATGTCAGGAAGCAGCAGCATAGTCATTTCTTCATGTCGTAGTACATTTATGTCAGAAAGCAGTAGTGTGGTCGATTTGACAATTTCTGACCCTTTCTTTAATGGACAGCATGAATGTAACATGACTGGCATGTCCAGTAAGGAAAGCCACTCAGGCCCTCCTTCAGCTACAACATCTTTGTCAAGAAGCAGCGACATAGATGATTCACCGTGCTCTAGTACACCTATGTCAGGAAGCAGCAGCATAGTCGATTTGACGATGCCTGACACTTTTGGTAGTGAAGACTGTGAATACAATATAGCTGGCATGCCCACAAAGGATAGCCACTCGGACCCCTCTCCAACTACCATGGAAATGGATGTCATTGACCTTTTGAGCCCACCCCCAGCACCTAGCACACGTTTTCTTTCAAAATGTAAAGGCGACACAGAACCAGATTATCTACCGAACATGGATGGCATGCCAACCAAGGATGGCGGCTCAGAGGCTCGTCAAACTAGTACAATGGAAATGGATGTTATTGACCTCTTGAGTCCTCCTCAGGCACCAAGCACAGGTTTCCTTTCAAAATGTAAGGGCGACGCAGAACCAACAAGTGTTATTGATCTGAGTGGTTCAGATGTTGAAATGTCACCTGAACATGCTCTGAAGTCAAAAGAACTCAGATTGTTCCTGGCTAGCATTAGGGCAGAAATATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115016.p1 GENE.S_Transcript_115016~~S_Transcript_115016.p1 ORF type:complete len:726 (+),score=150.52,XPG_I|PF00867.14|1.9e-19,XPG_I|PF00867.14|4.1e+03,XPG_N|PF00752.13|5.7e-13 S_Transcript_115016:141-2318(+)
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQKVNKSYCAAKEKVYLRGLFHRLRALIALNCSLIFVTDGAIPAVKISTYRKRLNTAHEDAGDDAERDKISSLRRNKGSEFSCMIKEAKTLGRALGIPCLDGIEEAEAQCALLNSESICDGCFSSDSDVFLFGARTVYRDICLEKGGYVVCYEMGDIEHKLGLGRNSLIALALLLGSDYSHGVYGFGPESACQVIRSVGEDAILQRIASDGISFLKSLKTSKKHGQFPVNNGKENNTAPTGKATGNELLRVVDAYMKPKCHSADSDPVYRALAVHPFQHTELQQICAQFFEWPPEKTDEYILPRIAERDLRRFANLRSSSSQLGVALPLHEMPVKCPIAEVLKHRRVVGKECFEVSWENFDGLKTSIVPADLVESACPEKIEEFEERRAQKKQKNKPRPRKKSEDKASVANVDQKLQQLLLDIEAEDNVRSRNPLCSSTSVSGSSIVGSLFSSTSMSGSSSIVISSCRSTFMSESSSVVDLTISDPFFNGQHECNMTGMSSKESHSGPPSATTSLSRSSDIDDSPCSSTPMSGSSSIVDLTMPDTFGSEDCEYNIAGMPTKDSHSDPSPTTMEMDVIDLLSPPPAPSTRFLSKCKGDTEPDYLPNMDGMPTKDGGSEARQTSTMEMDVIDLLSPPQAPSTGFLSKCKGDAEPTSVIDLSGSDVEMSPEHALKSKELRLFLASIRAEIS*

Click here to download the sequence:
Link to NCBI Protein BLAST