Transcript Information: S_Transcript_115023.p1


Annotated TAIR IDAT3G48900.2
Annotated Gene Namesingle-stranded DNA endonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18131854-18136239 | Forward length=600
E-Value4E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76711533493868
Replicate 20
Replicate 30.12267895399291
Condition 2: 8 Hour
Replicate 10.42556211275875
Replicate 20.34723490128179
Replicate 30.56716224226114
Condition 3: 24 Hour
Replicate 10.1453096462789
Replicate 20.60302824593385
Replicate 30.27962355216315


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115023.p1 GENE.S_Transcript_115023~~S_Transcript_115023.p1 ORF type:3prime_partial len:451 (+),score=98.65 S_Transcript_115023:622-1971(+)
ATGGGAGACATAGAGCATAAACTTGGACTTGGAAGAAATTCATTGATTGCCCTAGCCCTTCTTCTGGGAAGTGATTATTCTCATGGAGTCTATGGATTTGGACCTGAGTCAGCATGCCAAGTCATTAGATCAGTCGGCGAAGATGCCATTCTTCAACGCATTGCATCAGATGGTATATCTTTCTTAAAGTCGCTGAAAACCTCGAAGAAACATGGACAGTTCCCTGTGAACAACGGAAAAGAGAATAATACAGCTCCTACTGGAAAGGCTACTGGGAATGAATTGTTACGGGTTGTGGATGCATATATGAAGCCTAAGTGTCATTCTGCAGACTCGGATCCTGTATATAGGGCTCTTGCTGTGCATCCTTTTCAGCATACTGAGCTTCAGCAAATATGTGCTCAGTTCTTTGAGTGGCCTCCTGAGAAAACAGATGAATATATCCTTCCAAGGATTGCGGAAAGAGATCTACGGAGATTTGCCAATTTGCGTTCATCATCATCGCAATTGGGAGTTGCACTTCCATTGCATGAGATGCCAGTTAAGTGTCCTATAGCAGAAGTTCTTAAGCACAGAAGAGTTGTAGGTAAAGAATGCTTCGAAGTGTCATGGGAAAATTTTGACGGCCTTAAAACTTCCATAGTACCAGCTGATCTTGTAGAGAGTGCTTGTCCCGAGAAAATTGAAGAATTTGAGGAAAGGAGAGCTCAGAAGAAGCAGAAAAACAAACCAAGACCTAGGAAGAAATCAGAAGACAAAGCTTCCGTGGCCAACGTTGATCAGAAACTCCAACAATTGTTACTTGACATCGAGGCTGAGGAAAATGTGAGAAGCAGAAACCCTTTGTGCTCTAGTACATCTGTGTCAGGAAGCAGCATAGTCGGTTCTTTGTTCTCCAGTACATCTATGTCAGGAAGCAGCAGCATAGTCGATTTGACGATGCCTGACACTTTTGGTAGTGAAGACTGTGAATACAATATAGCTGGCATGCCCACAAAGGATAGCCACTCGGACCCCTCTCCAACTACCATGGAAATGGATGTCATTGACCTTTTGAGCCCACCCCCAGCACCTAGCACACGTTTTCTTTCAAAATGTAAAGGCGACACAGAACCAGATTATCTACCGAACATGGATGGCATGCCAACCAAGGATGGCGGCTCAGAGGCTCGTCAAACTAGTACAATGGAAATGGATGTTATTGACCTCTTGAGTCCTCCTCAGGCACCAAGCACAGGTTTCCTTTCAAAATGTAAGGGCGACGCAGAACCAACAAGTGTTATTGATCTGAGTGGTTCAGATGTTGAAATGTCACCTGAACATGCTCTGAAGTCAAAAGAACTCAGATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115023.p1 GENE.S_Transcript_115023~~S_Transcript_115023.p1 ORF type:3prime_partial len:451 (+),score=98.65 S_Transcript_115023:622-1971(+)
MGDIEHKLGLGRNSLIALALLLGSDYSHGVYGFGPESACQVIRSVGEDAILQRIASDGISFLKSLKTSKKHGQFPVNNGKENNTAPTGKATGNELLRVVDAYMKPKCHSADSDPVYRALAVHPFQHTELQQICAQFFEWPPEKTDEYILPRIAERDLRRFANLRSSSSQLGVALPLHEMPVKCPIAEVLKHRRVVGKECFEVSWENFDGLKTSIVPADLVESACPEKIEEFEERRAQKKQKNKPRPRKKSEDKASVANVDQKLQQLLLDIEAEENVRSRNPLCSSTSVSGSSIVGSLFSSTSMSGSSSIVDLTMPDTFGSEDCEYNIAGMPTKDSHSDPSPTTMEMDVIDLLSPPPAPSTRFLSKCKGDTEPDYLPNMDGMPTKDGGSEARQTSTMEMDVIDLLSPPQAPSTGFLSKCKGDAEPTSVIDLSGSDVEMSPEHALKSKELRL

Click here to download the sequence:
Link to NCBI Protein BLAST