Transcript Information: S_Transcript_115094.p1


Annotated TAIR IDAT4G38380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17971855-17974787 | Reverse length=560
E-Value2.1E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.104302263515
Replicate 24.9513851152178
Replicate 35.8736766734899
Condition 2: 8 Hour
Replicate 16.2638935254945
Replicate 26.1651794106177
Replicate 34.7837545780156
Condition 3: 24 Hour
Replicate 15.8757689916945
Replicate 24.2634893064416
Replicate 36.2430802982961


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115094.p1 GENE.S_Transcript_115094~~S_Transcript_115094.p1 ORF type:complete len:606 (+),score=122.89,MatE|PF01554.14|0.046,MatE|PF01554.14|1.8e-11,MatE|PF01554.14|5e+02,MatE|PF01554.14|2.4e-10,Polysacc_synt_C|PF14667.2|6.4e+03,Polysacc_synt_C|PF14667.2|6.3e+03,Polysacc_synt_C|PF14667.2|4.1e-08,Polysacc_synt_C|PF14667.2|1.6e+04,Polysacc_synt_C|PF14667.2|3.1e+03 S_Transcript_115094:328-2145(+)
ATGAGCAGGGTAGAAAGGATGACGACTGCTCAATTTTGTGGTGGAAATATCTCCACTGCATTAACTAGCACTAGGAGAGGATGGAGCATGCTGAAGAGGACTAATGGCTCAAATTCTCTGGAGCGATCAGGAGGGATTTGTCATGCATCATTACAAGCTATTCGTAAGGGTTCTGGAGATGTTCCGAGACACTGCCATTTATATGTTAATAGAAGAAACCTTTCTCCTGAAGAAGCCATTCGATGTAGAAAGCCTTTTGAGAATGTGCTACATAATCGAGTGAGTTCAGATTGCAGCATCGAGCCTTGTGATGTGGAGGATGTTCCCAGTGATTTGGAGGAGGAACCTCATGATTTGAAGGAGTTCACAATAGAGAAAGGCAAGGAAATCAACGGTTTAAGTGATTCAACATGCCTGCTTCCAGATCAAAGGCAATCTCATAATGTTAAAAAGGAGCTTATAATGCTTTCTTTGCCAGCAATGGCTAGCCAGGCAATTGATCCTTTAGCGCAGCTGATGGAGACTGCTTATATTGGCAGATTAGGTCCTGTACAATTGGCATCAGCTGGTGTTTCTGTATCAATCTTCAATATAATCTCAAAGTTATTTAACATGCCACTTCTGAGTGTTGCCACTTCTTTTGTTGCTGAAGACATTGCTAAGTCTACATCAGGGCGTGAAGGCAACAATAATGGTAAGCTCGACCACGAAGTCAATGAAAGAAAGCAATTATCGTCTGTTTCTACTGCCTTACTGCTTGCTCTTGGGATTGGCGTCATTGAGGCTTCCGCATTGCTTTTGGGATGTGGACCATTCCTGAGTTTGATGGGTGTCTCACCAGATTCTCCAATGCGAGCTCCAGCAGAGAAATTTTTGTCAATTAGAGCTCTTGGGGCCCCTGCTGTTGTTCTTTCTTTGGCTCTCCAGGGTGTTCTCAGGGGCTTTAAGGATACAAAGACCCCTGTCTTCTGTCTAGGTATTGCTAATCTTGCAGCTGTTTTTCTTTTTCCACTTCTCATAAATTATTTTCAGATGGGTGTAACTGGTGCAGCCATGGCCACTGTTCTATCCCAATACATAGGTAGCTTTTTGATGATGTGTTATCTTAGTAAGAGAGCAGTGTTATTACCTCCAAAGTTGGGAGATCTCCGGTTTGGTGTCTATCTAAAGTCTGGTGGCTTTCTTATTGGAAGAACCTTGGCTGTTTTGGCAACTATGACCATTGGAACCTCCATGGCTGCTCGTCAGGGTCCTGTAGCTATGGCTGCTCATCAAGTCTGTTTGCAAGTCTGGTTGGCTGTTTCTCTCCTAACTGATGCATTAGCCTCATCTGCACAGGCTCTGGTTGCTAGTTCCCTGTCAAGGGGTGACTACAATACAGTGAAAGAGCTGACTAACTTCGTATTGAAGATTGGAGTACTCACAGGTGCTGCTTTGGCTGCAATTTTGGGATCATCTTTTGGTTCTTTGGCAAATATGTTTACAAAAGACACTGGGGTATTAGAAATTGTGAAATCTGGCACTCTGTTTGTCAGTGCTAGCCAACCGTTCAATGCTTTGGCTTTTATCTTTGATGGTCTTCACTACGGTGCTTCAGATTTTCCTTATGCTGCGTGTTCCATGATGTTAGTAGGGGCAATATCCACTGCAGTTCTTCTGTATGCTCCTTCAGCAATGGGTCTTCCTGGTGTCTGGTTGGGCTTGACTCTCTTTATGGCCCTGCGTATGGTAGCAGGATACGTCAGAATACAGTCGAAAAATGGTCCATGGTGGTTCTTGCATAGTAAATCTACACAACTTGTAGGAATTAATGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115094.p1 GENE.S_Transcript_115094~~S_Transcript_115094.p1 ORF type:complete len:606 (+),score=122.89,MatE|PF01554.14|0.046,MatE|PF01554.14|1.8e-11,MatE|PF01554.14|5e+02,MatE|PF01554.14|2.4e-10,Polysacc_synt_C|PF14667.2|6.4e+03,Polysacc_synt_C|PF14667.2|6.3e+03,Polysacc_synt_C|PF14667.2|4.1e-08,Polysacc_synt_C|PF14667.2|1.6e+04,Polysacc_synt_C|PF14667.2|3.1e+03 S_Transcript_115094:328-2145(+)
MSRVERMTTAQFCGGNISTALTSTRRGWSMLKRTNGSNSLERSGGICHASLQAIRKGSGDVPRHCHLYVNRRNLSPEEAIRCRKPFENVLHNRVSSDCSIEPCDVEDVPSDLEEEPHDLKEFTIEKGKEINGLSDSTCLLPDQRQSHNVKKELIMLSLPAMASQAIDPLAQLMETAYIGRLGPVQLASAGVSVSIFNIISKLFNMPLLSVATSFVAEDIAKSTSGREGNNNGKLDHEVNERKQLSSVSTALLLALGIGVIEASALLLGCGPFLSLMGVSPDSPMRAPAEKFLSIRALGAPAVVLSLALQGVLRGFKDTKTPVFCLGIANLAAVFLFPLLINYFQMGVTGAAMATVLSQYIGSFLMMCYLSKRAVLLPPKLGDLRFGVYLKSGGFLIGRTLAVLATMTIGTSMAARQGPVAMAAHQVCLQVWLAVSLLTDALASSAQALVASSLSRGDYNTVKELTNFVLKIGVLTGAALAAILGSSFGSLANMFTKDTGVLEIVKSGTLFVSASQPFNALAFIFDGLHYGASDFPYAACSMMLVGAISTAVLLYAPSAMGLPGVWLGLTLFMALRMVAGYVRIQSKNGPWWFLHSKSTQLVGING*

Click here to download the sequence:
Link to NCBI Protein BLAST