Transcript Information: S_Transcript_115170.p1


Annotated TAIR IDAT4G25100.1
Annotated Gene NameFe superoxide dismutase 1
Annotated Gene Symbol(s)FSD1, ATFSD1
Annotation TypeOrtholog
Chromosome Positionchr4:12884649-12886501 | Reverse length=212
E-Value4.4E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1751.79139676035
Replicate 2797.95186356848
Replicate 3972.80050719568
Condition 2: 8 Hour
Replicate 11139.3732857765
Replicate 21247.7746241317
Replicate 31553.4857028844
Condition 3: 24 Hour
Replicate 1807.32569413877
Replicate 21060.4370980762
Replicate 31053.5355902293


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115170.p1 GENE.S_Transcript_115170~~S_Transcript_115170.p1 ORF type:complete len:257 (+),score=73.67,Sod_Fe_C|PF02777.14|3.6e-38,Sod_Fe_N|PF00081.18|1.5e-27 S_Transcript_115170:352-1122(+)
ATGCCTCCTGCTGCTGCTACTGCTACTGCGATTTCACTGTCTTCAACCTTTCTCTCTCGTGAAGGGTTTAATGGGGGGCAAAAATCTGTGCCATTCAGATTCAGGGAGAGACAAGTTAGAAGAGCCGGTGCTGCTGTAGTCACTGCCAAATTTGACTTGAAGCCCCCACCTTATGCATTTGATGCCCTAGAGCCTCTTATGAGCAAACAGACATTTGAGTTTCACTGGGGAAAGCATCATAGGGCTTACGTGGACAACTTGAACAAACAAATAGTTGGAACAGAATTAGATGGATTGGCACTGGAGGATGTAGTGCGGACTACTTATAACAAGGGTGAGCCTCTTCCAGCCTTCAATAATGCAGCACAGGCTTGGAACCATGAATTCTTCTGGGAGTCTATGAAGCCCGGTGGTGGGGGAAAGCCTTCTGGAGAGCTTTTGGCTCAAATTGAGAAGGATTTTGGTTCTTTTGATACATTTGTAACCGAGTTCAAGACTGCTGCAGCTACACAGTTTGGTTCTGGTTGGGCTTGGCTTGTGTACAAGGTGGAAAAAGATGAAAAGAAGTTAGCTGTTGTCAAGACTCCCAATGCTGTTAACCCCCTCGTCTTGGGATATTATCCACTTCTTACTATCGATGTTTGGGAGCATGCATATTATTTGGATTACCAGAACCGAAGGCCTGATTTCATATCAGTGTTCGTGGAGCAACTTGTTTCCTGGGATGCAGTCAATGCAAGATACGAGGCAGCCAAGGCTGCTGCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115170.p1 GENE.S_Transcript_115170~~S_Transcript_115170.p1 ORF type:complete len:257 (+),score=73.67,Sod_Fe_C|PF02777.14|3.6e-38,Sod_Fe_N|PF00081.18|1.5e-27 S_Transcript_115170:352-1122(+)
MPPAAATATAISLSSTFLSREGFNGGQKSVPFRFRERQVRRAGAAVVTAKFDLKPPPYAFDALEPLMSKQTFEFHWGKHHRAYVDNLNKQIVGTELDGLALEDVVRTTYNKGEPLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLAQIEKDFGSFDTFVTEFKTAAATQFGSGWAWLVYKVEKDEKKLAVVKTPNAVNPLVLGYYPLLTIDVWEHAYYLDYQNRRPDFISVFVEQLVSWDAVNARYEAAKAAAN*

Click here to download the sequence:
Link to NCBI Protein BLAST