Transcript Information: S_Transcript_115172.p1


Annotated TAIR IDAT4G25100.1
Annotated Gene NameFe superoxide dismutase 1
Annotated Gene Symbol(s)FSD1, ATFSD1
Annotation TypeOrtholog
Chromosome Positionchr4:12884649-12886501 | Reverse length=212
E-Value3.5E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66950946503599
Replicate 20.69379841375833
Replicate 30.23198410168051
Condition 2: 8 Hour
Replicate 10.67060975840041
Replicate 20.28140690112864
Replicate 30.93843354235767
Condition 3: 24 Hour
Replicate 10.27477840868672
Replicate 21.567936649936
Replicate 32.6966965716162


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115172.p1 GENE.S_Transcript_115172~~S_Transcript_115172.p1 ORF type:5prime_partial len:159 (+),score=39.12,Sod_Fe_N|PF00081.18|9.8e-23,Sod_Fe_C|PF02777.14|3.9e-17 S_Transcript_115172:3-479(+)
GCCCTAGAGCCTCTTATGAGCAAACAGACATTTGAGTTTCACTGGGGAAAGCATCATAGGGCTTACGTGGACAACTTGAACAAACAAATAGTTGGAACAGAATTAGATGGATTGGCACTGGAGGATGTAGTGCGGACTACTTATAACAAGGGTGAGCCTCTTCCAGCCTTCAATAATGCAGCACAGGCTTGGAACCATGAATTCTTCTGGGAGTCTATGAAGCCCGGTGGTGGGGGAAAGCCTTCTGGAGAGCTTTTGGCTCAAATTGAGAAGGATTTTGGTTCTTTTGATACATTTGTAACCGAGTTCAAGACTGCTGCAGCTACACAGTTTGGTTCTGGTTGGGCTTGGCTTGTGTACAAGGTGGAAAAAGATGAAAAGAAGTTAGCTGTTGTCAAGACTCCCAATGCTGTTAACCCCCTCGTCTTGGGATATTATGTGAGTATCGCAACGATTAAAACCCTTCAATATCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115172.p1 GENE.S_Transcript_115172~~S_Transcript_115172.p1 ORF type:5prime_partial len:159 (+),score=39.12,Sod_Fe_N|PF00081.18|9.8e-23,Sod_Fe_C|PF02777.14|3.9e-17 S_Transcript_115172:3-479(+)
ALEPLMSKQTFEFHWGKHHRAYVDNLNKQIVGTELDGLALEDVVRTTYNKGEPLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLAQIEKDFGSFDTFVTEFKTAAATQFGSGWAWLVYKVEKDEKKLAVVKTPNAVNPLVLGYYVSIATIKTLQYP*

Click here to download the sequence:
Link to NCBI Protein BLAST