Transcript Information: S_Transcript_115175.p1


Annotated TAIR IDAT4G25100.1
Annotated Gene NameFe superoxide dismutase 1
Annotated Gene Symbol(s)FSD1, ATFSD1
Annotation TypeOrtholog
Chromosome Positionchr4:12884649-12886501 | Reverse length=212
E-Value1.4E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6085250536951
Replicate 23.5555735237317
Replicate 31.6004027179984
Condition 2: 8 Hour
Replicate 10.88121447591459
Replicate 21.9413587662573
Replicate 33.2590345511748
Condition 3: 24 Hour
Replicate 14.1523332254848
Replicate 27.4921691161479
Replicate 35.6280594953565


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115175.p1 GENE.S_Transcript_115175~~S_Transcript_115175.p1 ORF type:complete len:242 (+),score=62.29,Sod_Fe_C|PF02777.14|3.1e-38,Sod_Fe_N|PF00081.18|1.4e-27 S_Transcript_115175:878-1603(+)
ATGATTTCATTTTGGTATTTCGCTGACTTTTACATTTTCTTATCTGACAATATGCTGCTTCAGAGACAAGTTAGAAGAGCCGGTGCTGCTGTAGTCACTGCCAAATTTGACTTGAAGCCCCCACCTTATGCATTTGATGCCCTAGAGCCTCTTATGAGCAAACAGACATTTGAGTTTCACTGGGGAAAGCATCATAGGGCTTACGTGGACAACTTGAACAAACAAATAGTTGGAACAGAATTAGATGGATTGGCACTGGAGGATGTAGTGCGGACTACTTATAACAAGGGTGAGCCTCTTCCAGCCTTCAATAATGCAGCACAGGCTTGGAACCATGAATTCTTCTGGGAGTCTATGAAGCCCGGTGGTGGGGGAAAGCCTTCTGGAGAGCTTTTGGCTCAAATTGAGAAGGATTTTGGTTCTTTTGATACATTTGTAACCGAGTTCAAGACTGCTGCAGCTACACAGTTTGGTTCTGGTTGGGCTTGGCTTGTGTACAAGGTGGAAAAAGATGAAAAGAAGTTAGCTGTTGTCAAGACTCCCAATGCTGTTAACCCCCTCGTCTTGGGATATTATCCACTTCTTACTATCGATGTTTGGGAGCATGCATATTATTTGGATTACCAGAACCGAAGGCCTGATTTCATATCAGTGTTCGTGGAGCAACTTGTTTCCTGGGATGCAGTCAATGCAAGATACGAGGCAGCCAAGGCTGCTGCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115175.p1 GENE.S_Transcript_115175~~S_Transcript_115175.p1 ORF type:complete len:242 (+),score=62.29,Sod_Fe_C|PF02777.14|3.1e-38,Sod_Fe_N|PF00081.18|1.4e-27 S_Transcript_115175:878-1603(+)
MISFWYFADFYIFLSDNMLLQRQVRRAGAAVVTAKFDLKPPPYAFDALEPLMSKQTFEFHWGKHHRAYVDNLNKQIVGTELDGLALEDVVRTTYNKGEPLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLAQIEKDFGSFDTFVTEFKTAAATQFGSGWAWLVYKVEKDEKKLAVVKTPNAVNPLVLGYYPLLTIDVWEHAYYLDYQNRRPDFISVFVEQLVSWDAVNARYEAAKAAAN*

Click here to download the sequence:
Link to NCBI Protein BLAST