Transcript Information: S_Transcript_11524.p1


Annotated TAIR IDAT3G44330.1
Annotated Gene NameINVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16006754-16010671 | Forward length=565
E-Value3.6E-303
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.116382860702
Replicate 248.639306784645
Replicate 343.163158347333
Condition 2: 8 Hour
Replicate 152.692895651329
Replicate 252.319349728884
Replicate 348.195620158
Condition 3: 24 Hour
Replicate 139.374728266997
Replicate 241.210563906903
Replicate 343.949523584223


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11524.p1 GENE.S_Transcript_11524~~S_Transcript_11524.p1 ORF type:complete len:567 (+),score=93.82,Nicastrin|PF05450.11|8e-07 S_Transcript_11524:311-2011(+)
ATGGAGATTCGGAGAGACAGCAAAATGCAAGTAGTAGGAACCTCGGTCTACTCAGTAATCGCACTCTTGTTCGTTCTTCTCGCTTGCGTTGAACTCGGCGACGCCGCTACTGCCGTCGACGTTTACCGGTTAATCCAGTACGATCTCGCCGGAGCTCCGTTTGGATCTCGTCTTGCTTCTCTCAATCACCACGCTAGCTCTTCTCTTTCTTCCACATCTTCTTCTAACAACGCCGATCTTTCTCGCACTGTCGTCATCATTCCCGTTCGTGACCTCGATGTCTCCTCCATTCAAGATTACATTGATCGTAAGCAGATACTTGGAGGTCTGTTGTTCTTGCTGCCTCGGGCTTTGAATTCTGAAAATGGGGAGGGCAAAGACGATGATTCTGAAAAAGAAGCAATAAGAAACAAACTGGTGCAGCTGGAAAGGCTTCTAGTACATGCGAATTTACCTTATCCTGTTTACTTTGCCTTTGAGGATGAGAACATAAAGGATGTCCTAGCTGATATTAAACGAAATGATGCTACTGGTCAGCCTGCCACAGCTACTACTGGCGGGTACAAGCTTGTCGTTTCAACAGCAGAAGCTAAGAAGGTTGCTTCCCCAAGCATCACCAATATTCAGGGATGGTTACCAGGTTTGAAAGGGGATGGAGATTCAACCCAAATCCCAACAATTGCTATAGTGGCATCATATGATACATTTGGGGCTGCACCAGCGTTGTCAGTTGGTAGTGATAGTAATGGGAGTGGTGTTGTGGCACTTCTGGAAATTGCTCGCCTATTTTCGATTCTGTATTCTAACCCTAAGACAAGAGGAAGATACAATTTACTTTTTGGGCTAACTTCTGGTGGACCTTATAACTACAATGGAACTCATAAGTGGCTTCGGAGCTTGGATCAACGTTTACGCGAGAGTATTGATTATGCTATATGTTTGAATAGTATTGGTTCATGGGACAGCGAGTTGTGGCTTCATGTATCAAAGCCTCCAGAAAATGCTTACATCAAGCAAATATCTAAAGGTTTCACTGATGTTGCTGAAGAATTGGGAATTAAGGTTGGCTTGAAGCACAAGAAGATAAACATTTCAAATCCGCGAGTAGCCTGGGAGCATGAACAGTTTTCAAGGATCAGAGTCACTGCAGCTACACTTTCTGAACTCTCTGCTGCACCTGAATTTTTGGAGAACTTTGGAGGTCTGTCAGATAGCAGAAATTTTGTTAGTGAATCTTCAGTCATCAAGGGCATAAAGTTAGTGGCTGAAAGTCTTGCGAGGCATATCTATGGACATGAAGGAAAGAACATCCAGATATTTGCAGAAAACAGTCATCTAGCAATCAACCCCTCCTATGTAAGTTCGTGGTTGTCTCTTCTATCACGGACACCTCGAGTTGCCCCCTTTCTTTTGAAGACTGATCCGTTTGTTGTTGCTCTGAGAAAGGAATTGGCAGAGCATACAGCTGAGGTGAATGTGCAACATGAGAGTTTGGATGGTTTGTTCACCTTCTATGATGCGACCAAGGCCACTTTGAATATATACCAGGTGGCAAGTGTGACATTTGACTTGCTGTTGTTGCTAGTTCTGGGATCATACTTGATAGTGCTATTCAGTTTCCTAGTTATCACCACAAGGGGTCTAGATGATCTCATCAGTTTATTTCGAAAGCCACCATCCCGGAAAGTAAAAACAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11524.p1 GENE.S_Transcript_11524~~S_Transcript_11524.p1 ORF type:complete len:567 (+),score=93.82,Nicastrin|PF05450.11|8e-07 S_Transcript_11524:311-2011(+)
MEIRRDSKMQVVGTSVYSVIALLFVLLACVELGDAATAVDVYRLIQYDLAGAPFGSRLASLNHHASSSLSSTSSSNNADLSRTVVIIPVRDLDVSSIQDYIDRKQILGGLLFLLPRALNSENGEGKDDDSEKEAIRNKLVQLERLLVHANLPYPVYFAFEDENIKDVLADIKRNDATGQPATATTGGYKLVVSTAEAKKVASPSITNIQGWLPGLKGDGDSTQIPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEIARLFSILYSNPKTRGRYNLLFGLTSGGPYNYNGTHKWLRSLDQRLRESIDYAICLNSIGSWDSELWLHVSKPPENAYIKQISKGFTDVAEELGIKVGLKHKKINISNPRVAWEHEQFSRIRVTAATLSELSAAPEFLENFGGLSDSRNFVSESSVIKGIKLVAESLARHIYGHEGKNIQIFAENSHLAINPSYVSSWLSLLSRTPRVAPFLLKTDPFVVALRKELAEHTAEVNVQHESLDGLFTFYDATKATLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRKPPSRKVKTA*

Click here to download the sequence:
Link to NCBI Protein BLAST