Transcript Information: S_Transcript_115242.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.25225855153824
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115242.p1 GENE.S_Transcript_115242~~S_Transcript_115242.p1 ORF type:5prime_partial len:169 (-),score=14.58,RVT_1|PF00078.23|2.8e-12 S_Transcript_115242:50-556(-)
GATGTTATTGGTTGGAGCATGAATTCTAATTTTATCACGCTGGTTCCCAAAAAAGATCGCTCTATTAGAATTGGGGTGCTGCATCTTACTATTTCTAACTCTCAGAGTACTTTTGTAGCAGGACGGCAGATCCTAGATGCTGCTTTGGTTGCAAATGAAGAGGTAGATGCGCAGAGATGTAAACGTCAGAAAAATGTGGTGTTCAAGTTAGATTTCGAAAAGGCCTATGATCAAGTTAGTCGGATTTTTTGGAAAAGGGTGATGGAGAGGAAGTGTTTTGGCGTACGGTGGAGGAAATGGATTTGTGGATGCCTATCAAATGCTTATTTTGCTGCTTTGGTAAACGGTGCTCCACAGGATTGGTTTAATTCATCGCGAGGTTTGCGGCAGGGGATCCATTGTCTCCAAATTTGTTTACATTGGTGGTTGATGTGCTTAGACGAATGTTGGAGAGATGTGTTGAGGTTGGTGCTGTTACTGGTTTTAAAGTGGGCAGTGATGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115242.p1 GENE.S_Transcript_115242~~S_Transcript_115242.p1 ORF type:5prime_partial len:169 (-),score=14.58,RVT_1|PF00078.23|2.8e-12 S_Transcript_115242:50-556(-)
DVIGWSMNSNFITLVPKKDRSIRIGVLHLTISNSQSTFVAGRQILDAALVANEEVDAQRCKRQKNVVFKLDFEKAYDQVSRIFWKRVMERKCFGVRWRKWICGCLSNAYFAALVNGAPQDWFNSSRGLRQGIHCLQICLHWWLMCLDECWRDVLRLVLLLVLKWAVMM*

Click here to download the sequence:
Link to NCBI Protein BLAST