Transcript Information: S_Transcript_115256.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value1E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6387316031515
Replicate 20.97815323161396
Replicate 30.95393462501382
Condition 2: 8 Hour
Replicate 12.153549268479
Replicate 21.983710716823
Replicate 31.9950793324859
Condition 3: 24 Hour
Replicate 10.80707697625348
Replicate 20.66986635201027
Replicate 30.68335588289723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115256.p1 GENE.S_Transcript_115256~~S_Transcript_115256.p1 ORF type:5prime_partial len:406 (+),score=77.33,zf-RING_2|PF13639.2|7.1e-09,zf-C3HC4_2|PF13923.2|3.1e-06,zf-RING_UBOX|PF13445.2|5.3e-06,zf-C3HC4|PF00097.21|6.5e-06 S_Transcript_115256:3-1220(+)
GAGCAAAGGAGAGAGATTAACCAGGAAAGACGGCCGAGAGTAGAGACCACTTGCACTGTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATGGTATTAATAGCAGTAAACAAGTGCAAAGGAGAGAGATTGACCAGGAAAGACGGCCGAGTGTAGAGACCACTTGCACTGTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATGGTATTAATAGCAGTAAACAAGTGCAAAGGAGAGAGATTGACCAGGAAAGACGGTCGAGTGTAGAGATCACTGGCACTTTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATCGTAGTAATCGCAGTAGGCAAGGGCAAAGGAGAGAGATTGTGCAGGAAAGACGGCCGAGTGTAGAAACCACTGGCACTGTGCCATTAAACCATTCGCAGGTCTCAAGGCCTGGTTACTGGAATGGTAGTAATAGTAGTAGCCAAGAGCAAAGGAGAGAGATTGACCAGGAAAGACGGCCGACAGACACTGGCATTGTGCCTAGTTACTGGAATTCGCAAGAGCTGAAAAGAGATGAGAACAGGAGGTTACAAGAGAGGGGAGACATTAACCAGGCAGCGAGGGAACCGAGAAGCCAGAGCCAGGCTAGGCCATTGCCTACTTATTGGGAGGGCAGTAGTAGTAGTAGTAATCAATTGGTGAAGTATAGGGGGAAAAAGGGTGATCAGAGTGATGGGGTTAGTAGTAAAGTGAGGGATGGGAATAGGGTAAGTGAATTGCAGAACAAGGAAGATAAGGAAAGAGTATTAACAAATGGAAGTGGTACTGGTAGGAAGTTGAAAGGGAATGAGATGGATGGTGGTGCTGCTGCATGCCCTATTTGCTTGGAGCCTTGGACTAGCGACGGGGACCACTCAGTTTGTTGCCTACCTTGCGGCCACCTATATGGTATGTCTTGCATCAAGAATTGGCTTGAGCAGGCAAATTCAAGGAAGTGCCCACAATGCAATGAGGCTTGCAATTTAGAAGAAGTCAGGAGAGTATATGGATTAAGTATTGGAGCCAAGGACAAAGAGTTACAAGAGAAAATCAAGTTACTTGAGGCTAAATGTGCTTCTCTGGAGCTGAAGGATAATGATTGGCAGAAGAAGGAAGCTGAGTGGCGCCAAAGAGAAGTCCATTTGCGCCTGCAACAGTACAAAGGCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115256.p1 GENE.S_Transcript_115256~~S_Transcript_115256.p1 ORF type:5prime_partial len:406 (+),score=77.33,zf-RING_2|PF13639.2|7.1e-09,zf-C3HC4_2|PF13923.2|3.1e-06,zf-RING_UBOX|PF13445.2|5.3e-06,zf-C3HC4|PF00097.21|6.5e-06 S_Transcript_115256:3-1220(+)
EQRREINQERRPRVETTCTVPSNYSQVSRPSYWNGINSSKQVQRREIDQERRPSVETTCTVPSNYSQVSRPSYWNGINSSKQVQRREIDQERRSSVEITGTLPSNYSQVSRPSYWNRSNRSRQGQRREIVQERRPSVETTGTVPLNHSQVSRPGYWNGSNSSSQEQRREIDQERRPTDTGIVPSYWNSQELKRDENRRLQERGDINQAAREPRSQSQARPLPTYWEGSSSSSNQLVKYRGKKGDQSDGVSSKVRDGNRVSELQNKEDKERVLTNGSGTGRKLKGNEMDGGAAACPICLEPWTSDGDHSVCCLPCGHLYGMSCIKNWLEQANSRKCPQCNEACNLEEVRRVYGLSIGAKDKELQEKIKLLEAKCASLELKDNDWQKKEAEWRQREVHLRLQQYKGS*

Click here to download the sequence:
Link to NCBI Protein BLAST