Transcript Information: S_Transcript_115259.p1


Annotated TAIR IDAT4G32430.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15652982-15655273 | Forward length=763
E-Value3.4E-281
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53159553029075
Replicate 20.49579302376438
Replicate 30.46049278610738
Condition 2: 8 Hour
Replicate 10.82532721576919
Replicate 21.117195937065
Replicate 31.3305772537442
Condition 3: 24 Hour
Replicate 10.46362424387029
Replicate 20.50929913654713
Replicate 30.44083473367244


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115259.p1 GENE.S_Transcript_115259~~S_Transcript_115259.p1 ORF type:5prime_partial len:801 (+),score=149.43,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|3.5e-06,PPR_2|PF13041.2|0.00047,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|29,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|4.4e+02,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|5.9e-10,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|48,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.00022,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.14,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|6.4,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|5.1,PPR|PF01535.16|6.2,PPR|PF01535.16|0.036,PPR|PF01535.16|2.2,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|0.00025,PPR|PF01535.16|0.28,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|1.6e+02,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.85,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|13,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|96,PPR_1|PF12854.3|38,PPR_1|PF12854.3|4.8e+03,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.024,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|7.1e+03,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|4.8e+03,PPR_3|PF13812.2|7.6e+02,PPR_3|PF13812.2|0.00059,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|1.6e+02 S_Transcript_115259:1-2403(+)
GACAATTCTAATATCCATGCGAGGTATTGGTTATCCAAGCTGCACCTCAAATACCATGTTCCAGGAGCCTGCAAAGCCGTGTCAACCCACCAATGGGCAAGTGTGACTGTCAGATGCTATTCAACCAACCATGCAGAACACTTGTTTGACAAAAGTCCTGCCAGAAACATTCCTTCTATCAACAACTTCATGCTCACTTGCATACGTGAGAATCTCTGTTCCAAGGCTCTCAAAATTTTCACAACAGAATTACGGCTTAATTATCCTCATGGAATTGATGAAGATGCTCTGGCTATTGCTATTAAAGCGTGTCGTGGGGACCTGAAACCTGGTGCAACCATCCACAGCTTTTCTGTGTCATCTGGGTTCATTCAATATCGCTCAGTCTCAAACTCCTTAATGAGTATGTACTGTAAAGCAGGTCAATATGATCAGGCGATTCAGATTTTTAACAGTATTGTTGAGCCTGATACTGTCTCCTACAACACCATTCTTGTCGGTTTTCCCAATAATGATGATGCTTTGAGTTTTGCATCTAAAATGAATGCAAAAGGTGTTGTATTTGACCCTGTTAGTTATACTATTGCTCTGTCAAACTGTTTGAATGTGAAAGGTTTTTTGTTTGGGTTCCAACTACACTGTAACATTCTAAAATCAGGGTTGAATAGTGAGGTTTTTGTCGGGAATGCTCTTATTACCTTATACTCTAGGTGGGGTCGCATTAATGAGGCTGAGAGAGTGTTTGATGAAATGCCTACTAAGGATTCAGTGTCTTGGAATGCTATGTTATGTGGATATGGCCAAGAGGGAAGATTTGGACTTGAAACAATGTGGACGTTTCGTGAAATGATGAGAATAGGGATGAAAGCAGATCATGTCTCATTAACTGCTGCAATTTCCAGTTGTGGATATGAGAGAAATCTGAACATGGGGAGGTTGCTACATTGCTTGAGTTTAAAGGTTGGTTGTGAGAAACATGGCTCTGTTAGTAACGTTTTGATGTCAACATATGCAAAATGTGAGGTAATTGAAGACAGTAAGATGGTATTTCAAGGGATGGCTGAAAGAAATGTGGTTTCTTGGACATCAATGATGTCTATATTTCAAGAGGATGCGGTTTCTCTCTTCCATGAGATGAGGATGGATGGAGTCCATCCAAATGACGTAACCTTTATTGCGGTAATCCATGCTGCTACACTGGGGATTTTGATTACTGAAGGTCAAATGATCCATGGATTTGGCATAAAGACTGGTTTTGTGTTAGAGTTGAATGTCTCAAACAGTCTTGTCACCATGTATGCAAAATTTGAATCAATGGGAGATTCAGTGAAGGTTTTCGAGGAGCTTCACTGTAGGGATATTGTATCTTGGAATACTTTGATTTCTGGATATGATCAGAACAAGCTCTTTATAGAAGCTCTGGAGGCATTTCACTTAGCACTCTCGGAGATCCAGCCAAATGAATACACATTTGGTAGTGTTTTGAGTGCAATTGGATCTGCTGAAGCCATTTCACTAAGGCATGGGCAGAGATGCCACTCTCACCTGCTGAAACTTGGATTAAATTCCAATCTAATTGTCTCTGCCGCCCTCCTGGATATGTATGCTAAGCGTGGAAGCCTCTACGAATCCAAGAGCATTTTCAATGAAATCAATCAGAGAAATCAATTTGCATGGACGGCAATAATTTCTGCCCATGCAAGACATGGGGACTATAACTCTGTTATGGAAATATTTAGAGAGATGGGGAAGGTAGGTGTAAATCCTGATTCTATCACATTCCTTTCCATGCTAACTGCATGTGGCAGGAAGGGCATGGTTGATGAAGGCTGTCAGATTTGGGACATGATGATCAAAGACAATCTAATTGAGCCTTCACCTGAGCACTATGCTTGTATGGTGGATATGTTGGGTCGTGCAGGGCGATTGAAAGAGGCAGAGGAGTTAGTCCTTCAGATTCCTGGAGGACCATCATTTTCTGCTTTACAGAGCTTGTTAGGAGCGTGCAGATTGCATGGGGATATGGAGTTGGGTCAGAGAGTTGCCCACACACTGATAAAAATGGAGCCTCATGAATCAGGTTCTTATGTTTTGATGTCAAATTTGTTTGCCCAAAAAGGGGACTGGGAAACTGTCTCCATAACAAGGAGAAGAATGAGAGATAGGAGAGTCATAAAAGAAATTGGATTCAGCTGGGCTGATGTGGGTGGTGCTGATGGTTCTTTGACTATGTATGGGTTTTCTTCAGATGATACATCTCATCCAAGGTCTGTGGAGATATACCGAATGGCAGGGTGCTTAGCATTGGAAATGAAAAGCCTGGAGAGGGAGAGAGAAAAGTCAAGGCTAATTGATGTAAATAAGCTGTCCACACTTGCAAACTCCATCATTGCCGTGGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115259.p1 GENE.S_Transcript_115259~~S_Transcript_115259.p1 ORF type:5prime_partial len:801 (+),score=149.43,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|3.5e-06,PPR_2|PF13041.2|0.00047,PPR_2|PF13041.2|0.0026,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|29,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|4.4e+02,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|5.9e-10,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|48,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.00022,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.14,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|6.4,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|5.1,PPR|PF01535.16|6.2,PPR|PF01535.16|0.036,PPR|PF01535.16|2.2,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|0.00025,PPR|PF01535.16|0.28,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|1.6e+02,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.85,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|13,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|96,PPR_1|PF12854.3|38,PPR_1|PF12854.3|4.8e+03,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.024,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|7.1e+03,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|4.8e+03,PPR_3|PF13812.2|7.6e+02,PPR_3|PF13812.2|0.00059,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|1.6e+02 S_Transcript_115259:1-2403(+)
DNSNIHARYWLSKLHLKYHVPGACKAVSTHQWASVTVRCYSTNHAEHLFDKSPARNIPSINNFMLTCIRENLCSKALKIFTTELRLNYPHGIDEDALAIAIKACRGDLKPGATIHSFSVSSGFIQYRSVSNSLMSMYCKAGQYDQAIQIFNSIVEPDTVSYNTILVGFPNNDDALSFASKMNAKGVVFDPVSYTIALSNCLNVKGFLFGFQLHCNILKSGLNSEVFVGNALITLYSRWGRINEAERVFDEMPTKDSVSWNAMLCGYGQEGRFGLETMWTFREMMRIGMKADHVSLTAAISSCGYERNLNMGRLLHCLSLKVGCEKHGSVSNVLMSTYAKCEVIEDSKMVFQGMAERNVVSWTSMMSIFQEDAVSLFHEMRMDGVHPNDVTFIAVIHAATLGILITEGQMIHGFGIKTGFVLELNVSNSLVTMYAKFESMGDSVKVFEELHCRDIVSWNTLISGYDQNKLFIEALEAFHLALSEIQPNEYTFGSVLSAIGSAEAISLRHGQRCHSHLLKLGLNSNLIVSAALLDMYAKRGSLYESKSIFNEINQRNQFAWTAIISAHARHGDYNSVMEIFREMGKVGVNPDSITFLSMLTACGRKGMVDEGCQIWDMMIKDNLIEPSPEHYACMVDMLGRAGRLKEAEELVLQIPGGPSFSALQSLLGACRLHGDMELGQRVAHTLIKMEPHESGSYVLMSNLFAQKGDWETVSITRRRMRDRRVIKEIGFSWADVGGADGSLTMYGFSSDDTSHPRSVEIYRMAGCLALEMKSLEREREKSRLIDVNKLSTLANSIIAVG*

Click here to download the sequence:
Link to NCBI Protein BLAST