Transcript Information: S_Transcript_115330.p1


Annotated TAIR IDAT5G48120.1
Annotated Gene NameARM repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19508210-19514774 | Reverse length=1134
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69667542500472
Replicate 20.69307192327272
Replicate 30.28967648298849
Condition 2: 8 Hour
Replicate 10.11165125820489
Replicate 20.11713009759019
Replicate 31.0044116672504
Condition 3: 24 Hour
Replicate 10
Replicate 20.1186586993526
Replicate 30.52821035403384


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115330.p1 GENE.S_Transcript_115330~~S_Transcript_115330.p1 ORF type:3prime_partial len:191 (+),score=26.73,MMS19_C|PF12460.4|8.3e-23 S_Transcript_115330:86-571(+)
ATGGCTGATCACAGTGAGCCTCGTCTAAATTTAGCAGATTCTATGCTGTTTCGAAACAGTTTTATCTCTGGGTTTACGTGGATAGGAAAAGGGCTGCTAATGAGGGGACATGAAAAGGTCAAAGACATAACCGAGATTCTTTTGCAGTGTTTGGTGTCTAGCAGTGAACTGGAACTCTCATGTGAGAAACAAGATCGGTCAGAGAGAGCCGAAGAGGCAACTGTGTTGCCCCCAGTGATGAAGCAAGCAGCTGAAGCATTTCATATTCTAATGAGTGATACTGAGGATTGTTTGAATAGAACATTTCATGCGACAATAAGGCCACTTTATAAGCAGCGCTATTTCTCTACTGTAGTGCCCATTTTGCGTTTGGCAATGATCAAATCTCAATCACGTGGAGCGAGACCTATGCTTTGCCGTGCAATTGGACATGTAATAACAGGTGCTCCTCTGGTGGCCGTGTTAACAGAGACTAAGAAGCTTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115330.p1 GENE.S_Transcript_115330~~S_Transcript_115330.p1 ORF type:3prime_partial len:191 (+),score=26.73,MMS19_C|PF12460.4|8.3e-23 S_Transcript_115330:86-571(+)
MADHSEPRLNLADSMLFRNSFISGFTWIGKGLLMRGHEKVKDITEILLQCLVSSSELELSCEKQDRSERAEEATVLPPVMKQAAEAFHILMSDTEDCLNRTFHATIRPLYKQRYFSTVVPILRLAMIKSQSRGARPMLCRAIGHVITGAPLVAVLTETKKLL

Click here to download the sequence:
Link to NCBI Protein BLAST