Transcript Information: S_Transcript_115336.p1


Annotated TAIR IDAT1G78260.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29447317-29450181 | Forward length=287
E-Value1.9E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4351765836113
Replicate 22.2351192035391
Replicate 32.0491928981778
Condition 2: 8 Hour
Replicate 12.2301061769551
Replicate 22.631982192909
Replicate 31.4628522866164
Condition 3: 24 Hour
Replicate 11.2849931465055
Replicate 20.51845320599487
Replicate 31.3187997074571


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115336.p1 GENE.S_Transcript_115336~~S_Transcript_115336.p1 ORF type:5prime_partial len:306 (+),score=21.38,RRM_1|PF00076.18|4.9e-16,RRM_6|PF14259.2|4.6e-13 S_Transcript_115336:3-920(+)
AAATTAAAAGTGACACCGGGGCTGCGTATATATATATATATATGCTACATGGCTAGCTACCACCATCAGTACCGATCACCGTTTGGTGACACAACTTACACGAAGGTATTTGTTGGAGGACTAGCATGGGAAACCCCCACTGAAAAAATGCGTGCTTATTTTGAGCAATTTGGTGAGATCCTTGAAGCTGTCATTATTTCTGATAAGAATACCGGCAAGTCCAAGGGCTACGGCTTTGTGACATTCCGGGATCCGGCGGCGGCAGCGAGGGCGTGCGTAGATTCAAATCCAATGATCGACGGTAGAAGAGCGAATTGTAACATAGCTTCGTTTGGGCGTCCTAGGCCTTCGCCACCAAGAGGTAGAAGCCAAGGAGGAGTAGCACAAGGCCAGTCACCGTCATCGTCATTTAGTGGAATGCCAACGCCACAACAGACATTGGCACCCCCCTTTTTTTATCCTTCTTATGGGTACCCAACTTACCCGACCTATGGTTACCAAGGAATATACAACCCACAAGTGGCACAATCGCAGTACTATGCAGCAGGAGCACAATACTATGGTGAAGGTGGGTCCAGTTCGTCTTCAACAATGGGGGGTCCGTATTATTATGGATATTCGAGGGCAGGAGCAGGATTCGGTACTTCAACCCCGGCGCATCGTATCTCAGGCCCCTCTTATATTTACTACCCTACGCAGTTAGAAGCTGGCTTCACTCCTTATCCTACTACTCCTCTGCCTCTTGCTTCTCTCCCCACCTCTTCTTCCACTACTACTCCTAGTACTACCGCTACCACTACCACTAGCAGCACCAGGCATCAACCTCCCTCTTCTACTACAGGAGAATCACAGGCTCAACAAAGCAGTTCCACAGAGACAGAGGCCGTGGTAATCAGTCCCGAGGGTCCAAGCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115336.p1 GENE.S_Transcript_115336~~S_Transcript_115336.p1 ORF type:5prime_partial len:306 (+),score=21.38,RRM_1|PF00076.18|4.9e-16,RRM_6|PF14259.2|4.6e-13 S_Transcript_115336:3-920(+)
KLKVTPGLRIYIYICYMASYHHQYRSPFGDTTYTKVFVGGLAWETPTEKMRAYFEQFGEILEAVIISDKNTGKSKGYGFVTFRDPAAAARACVDSNPMIDGRRANCNIASFGRPRPSPPRGRSQGGVAQGQSPSSSFSGMPTPQQTLAPPFFYPSYGYPTYPTYGYQGIYNPQVAQSQYYAAGAQYYGEGGSSSSSTMGGPYYYGYSRAGAGFGTSTPAHRISGPSYIYYPTQLEAGFTPYPTTPLPLASLPTSSSTTTPSTTATTTTSSTRHQPPSSTTGESQAQQSSSTETEAVVISPEGPST*

Click here to download the sequence:
Link to NCBI Protein BLAST