Transcript Information: S_Transcript_115350.p1


Annotated TAIR IDAT3G53510.1
Annotated Gene NameABC-2 type transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19837302-19839521 | Reverse length=739
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9495022637508
Replicate 21.8360157745505
Replicate 31.7393981327113
Condition 2: 8 Hour
Replicate 17.0690267486752
Replicate 26.1126965076646
Replicate 35.2920065482547
Condition 3: 24 Hour
Replicate 13.1812937122225
Replicate 22.2003700559561
Replicate 31.9939757712782


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115350.p1 GENE.S_Transcript_115350~~S_Transcript_115350.p1 ORF type:complete len:721 (+),score=89.84,ABC2_membrane|PF01061.20|3.1e-43,ABC2_membrane|PF01061.20|3.2e+03,ABC_tran|PF00005.23|9.4e-26,AAA_29|PF13555.2|1.1e+02,AAA_29|PF13555.2|2.2e-05,AAA_16|PF13191.2|1.9e-06,AAA_21|PF13304.2|0.029,AAA_21|PF13304.2|0.7,AAA_21|PF13304.2|1.5e+03 S_Transcript_115350:1375-3537(+)
ATGCCAATGTCTCCAATTGGAAATGGAAGTGAGCACAGTGAAGAGTTACCTGAGATCCCATATGTGAACCTTAAGAGTCACAAGCAAATGCAATACTCCCAAAGGACTAAACCCAGCCTTTCCCCGACCCTCGGCGAGCTCTTGAAATGGGTCGGTGATCCGGATCACCATGCCATAGAGCTAAGCGATAATGGTAGCTCCAAATCCACCATGATCACCACATACCCATTTGTGCTGTCTTTCCATAATCTTACTTACAGTGTCAAAGTCAAGAAGAAGCGTTCGTCAGAACAGAAGGTTCTGTTGAATAACATATCAGGGGAGGCAAGGGAAGGGGAGATTATGGCAGTTTTAGGGGCGAGTGGGTCAGGGAAATCAACCCTGATTGACGCCTTAGCGGATAGGATATCGAAAGATAGCTTGAAAGGGTCTGTTCTTTTGAATGGAGAGGTTTTGGAGTCCAAGTTCTCTAAAGTCATGTCAGCTTATGTTATGCAGGAAGACCTTCTGTTCCCAATGTTGACAGTTACAGAAACACTCATGTTCTCAGCTGAGTTTCGGCTGCCTAGGACGCTGTCTAAGTCGAAAAAGAAGGCTAGAGTTGAGGCTTTGATAGATCAGCTTGGTCTCAAAAATGCTGCTAATACAGTGATTGGTGATGAAGGTCACCGGGGTGTGTCGGGTGGTGAAAGGAGGAGGGTTTCGATAGGCGTTGACATCATCCATGACCCCATAATTTTGTTCCTGGATGAGCCAACCTCGGGGCTTGATTCTACGAGCGCTTTTATGGTGGTGAAGGTGCTCCAAAGGATCGCTCAGAGCGGGAGTATTGTGATCATGTCAATACACCAGCCAAGTTCGCGTATCCTCAACTTGCTAGACCGGCTGATTTTCCTGTCTCGTGGGAGGACTGTGTTCAGTGGAACCCCGTCCAATCTCCCTGAATTCTTCTCCGAGTTTGGGCATCACATCCCAGAGAATGAGAACCGCACAGAGTTCGCCCTTGACCTCATCCGGGAGCTTGAAGAGTCCCCTGGCGGAACCCAAGGCTTGGTTGAGTTCAACCAGTCCTGGAAACAACATTTGGATTTGGCGCCATCTGTGGAAAACGATTATCATCCCAAGCTGTCATTGAATGATGCAATTAGTGCTAGCATCTCAAAAGGGAAGTTGGTGTCTGGTGCTGGTGATGATACATCATCATCAACATCAGTACCTAAATACGCTAATCCTTTCTGGAAGGAAGTGTATGTGATCGGAAAGAGATCAATGCTAAACGCAAGGAGAATGCCAGAACTATTTGCAATCCGTCTAGCGGCGGTTATGGTTACAGGTATAATCCTAGCAACCATCTTCTGGCACCTAGACCAGTCCCCCAAAGGCGCCCAAGAACGTGTCGGGTTCTTTGCCTTTGCCATGTCCACAACCTTCTACACTTGCGCAGAAGCCATCCCAACATTCCTCCAAGAGAGATACATCTTCATGAGAGAAACAGCCTACAACGCATACAGAAGATCCTCCTACGTCTTAAGCCATGCCCTCATCTCTTTGCCATCCTTGATCCTGCTTTCCATCACCTTTGCAGCCATCACCTTCTTTGCTGTAGGACTGGCAGGCGGAGTCTCGGGTTTCTTCTACTTCTTTGCATTCATAATGGCTTCCTTCTGGTCGGGCCACTCCTTCGTCACATTCCTATCAGGAGTTGTCACACACGTCATGATTGGCTACACAGTTGTGGTTGCGGTTTTGGCCTATTTCCTGCTCTTCAGTGGGTTCTTCATCACCCGAGATAGAATCCCTCCTTACTGGATTTGGTTCCACTATATCTCCCTAGTTAAGTACCCCTACGAAGGTGTCCTTCACAACGAGTTCGATGACCCAACCAAGTGCTTCGTCAAGGGGGTCCAAATGTTCGACAATACTCCGCTTCAGGCTGTTCCTGAAGCTCTCAAGTTGAACCTCTTGAAGACTTTGAGTCAGACATTGGGAACCAATCTTACAAGCACTAGTTGTGTGACTACAGGAATGGATATACTTGAGCAACAGGGGATCACTGACCTCAGTAAATTGAGCTGCCTTTGGATCACCATTGCCTGGGGTTTTCTGTTTAGGTTCTTGTTTTATGTCACACTTATGTTTAGCTCCAAAAATAAGAGGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115350.p1 GENE.S_Transcript_115350~~S_Transcript_115350.p1 ORF type:complete len:721 (+),score=89.84,ABC2_membrane|PF01061.20|3.1e-43,ABC2_membrane|PF01061.20|3.2e+03,ABC_tran|PF00005.23|9.4e-26,AAA_29|PF13555.2|1.1e+02,AAA_29|PF13555.2|2.2e-05,AAA_16|PF13191.2|1.9e-06,AAA_21|PF13304.2|0.029,AAA_21|PF13304.2|0.7,AAA_21|PF13304.2|1.5e+03 S_Transcript_115350:1375-3537(+)
MPMSPIGNGSEHSEELPEIPYVNLKSHKQMQYSQRTKPSLSPTLGELLKWVGDPDHHAIELSDNGSSKSTMITTYPFVLSFHNLTYSVKVKKKRSSEQKVLLNNISGEAREGEIMAVLGASGSGKSTLIDALADRISKDSLKGSVLLNGEVLESKFSKVMSAYVMQEDLLFPMLTVTETLMFSAEFRLPRTLSKSKKKARVEALIDQLGLKNAANTVIGDEGHRGVSGGERRRVSIGVDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSSRILNLLDRLIFLSRGRTVFSGTPSNLPEFFSEFGHHIPENENRTEFALDLIRELEESPGGTQGLVEFNQSWKQHLDLAPSVENDYHPKLSLNDAISASISKGKLVSGAGDDTSSSTSVPKYANPFWKEVYVIGKRSMLNARRMPELFAIRLAAVMVTGIILATIFWHLDQSPKGAQERVGFFAFAMSTTFYTCAEAIPTFLQERYIFMRETAYNAYRRSSYVLSHALISLPSLILLSITFAAITFFAVGLAGGVSGFFYFFAFIMASFWSGHSFVTFLSGVVTHVMIGYTVVVAVLAYFLLFSGFFITRDRIPPYWIWFHYISLVKYPYEGVLHNEFDDPTKCFVKGVQMFDNTPLQAVPEALKLNLLKTLSQTLGTNLTSTSCVTTGMDILEQQGITDLSKLSCLWITIAWGFLFRFLFYVTLMFSSKNKRR*

Click here to download the sequence:
Link to NCBI Protein BLAST