Transcript Information: S_Transcript_11542.p1


Annotated TAIR IDAT3G06350.1
Annotated Gene Namedehydroquinate dehydratase, putative / shikimate dehydrogenase, putative
Annotated Gene Symbol(s)EMB3004, MEE32
Annotation TypeOrtholog
Chromosome Positionchr3:1924536-1927701 | Reverse length=603
E-Value7.8E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.557702662111
Replicate 223.051959459704
Replicate 321.858057580564
Condition 2: 8 Hour
Replicate 125.607096365212
Replicate 226.471173731606
Replicate 327.714757022461
Condition 3: 24 Hour
Replicate 123.122362057296
Replicate 221.250084538447
Replicate 323.501242155254


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11542.p1 GENE.S_Transcript_11542~~S_Transcript_11542.p1 ORF type:complete len:513 (+),score=124.53,DHquinase_I|PF01487.11|4.4e-65,Shikimate_dh_N|PF08501.7|1.9e-26,Shikimate_DH|PF01488.16|4.4e+03,Shikimate_DH|PF01488.16|1.1e-07 S_Transcript_11542:263-1801(+)
ATGAAGGGATTAACTCTAATCTGTGAAACAGTTATGGCTGCCACTGTTGATGAGATGGTCAGTCTGATGGTTAAAGCTAAGGAGTTTGGAGCAGATCTTGTTGAAGTTCGGTTGGATTACTTGGCTAATTTTGATCCTCATTCAGATGTCACCTCTTTGATCAAACGCTCTCCTTTGCCTACCCTCTTTACCTACAGACCTAAATGGGAAGGTGGACAGTATGAGGGTGATGAAGCCAAGCGGTTGGATGTGTTACGATTATCTATTGAACAAGGAGCTGATTACGTGGACATTGAATTACAGCGTGCAGATGAATTTAATAAATCCATAGAAGGGAAGAAGCCTGAAAAGTGCAAAGTCATAGTCTCATCTCATAACTATCAGAATACACCAGCAATTGAAGATCTTGGAAATCTTATTGCCAAAATACAATCTACTGGAGCTGATATAGTGAAGATTGCCACAACTGCCGTAGATGTGACTGATGTTGCCCGAATGTTCCAAATAACAGCAAATTCTCAAGTTCCAGTGATAGGACTTGTTATGGGTGAAAGGGGCTTAATTTCACGACTTCTTTGTCCTAAATTTGGTGGATACCTTACCTTTGGGACGATTGAGCCCGGAAAAGTTTCAGCTCCTGGGCAGCCGACATTGAAAGAGCTCGTGGATTTGTACAATTTTGGACAGATTGGACCAGACACTAAAGTATTTGGAATCATTGGGAAGCCAGTGAGTCACAGCAAATCCCCCCTCATATATAATGAAGCATTCAAGTCTGTTGGCTTCAATGGAGTTTATGTTCCATTTTTGGTGGACAATGTTCAAAATTTCTTCTCGACATACTCATCTGCAGATTTTGCTGGATTCAGCTGTACAATTCCACACAAGGAGGCTGCTTTTCAGTGCTGTGATGAGGTTGATCCTGTTGTCAAGTCAATAGGGGCTGTCAACTGCTTAATCAAGAGAGCAAATGATGGGAAATTAATGGGTTACAATACGGACTATATTGGTGCCATAACTGCCATTGAAAATGCATTAAGAGGAGCAAATATCAATGACATGGAAAAAGGTTCACCCTTAGCAGGAAAGCTGTTTGTCGTTGTTGGGGCTGGTGGCGCTGGCAAAGCACTGGCTTTTGGTGCAAAAGAGAAAGGAGCTAGAGTTGTGGTTGCCAATCGCACTTATGACCGAGCTAGAGAGCTAGCAAATGCTATAGGAGGAGATGCTGTTTCTCTAGCAGAGCTGGGGAGCTTCTATCCTGAAGATGGCATGATTCTTGCAAATACAACATCCATTGGGATGCAGCCTGGGGTGGATGAGACCCCTGTTCCAAAGGATGTTCTAAAGCATTATACCCTGGTCTTTGATGCTGTATACACTCCTAAGATAACCAGATTATTAAAGGAAGCAGAGCAATCTGGAAGTATTGTTGTTAGCGGGCTGGAGATGTTCATGGGGCAGGCATACGAACAATATGAGAGATTCACTGGATTGCCTGCACCAAAGGAACTATTTAGGAAAGTGTTGGCAGACCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11542.p1 GENE.S_Transcript_11542~~S_Transcript_11542.p1 ORF type:complete len:513 (+),score=124.53,DHquinase_I|PF01487.11|4.4e-65,Shikimate_dh_N|PF08501.7|1.9e-26,Shikimate_DH|PF01488.16|4.4e+03,Shikimate_DH|PF01488.16|1.1e-07 S_Transcript_11542:263-1801(+)
MKGLTLICETVMAATVDEMVSLMVKAKEFGADLVEVRLDYLANFDPHSDVTSLIKRSPLPTLFTYRPKWEGGQYEGDEAKRLDVLRLSIEQGADYVDIELQRADEFNKSIEGKKPEKCKVIVSSHNYQNTPAIEDLGNLIAKIQSTGADIVKIATTAVDVTDVARMFQITANSQVPVIGLVMGERGLISRLLCPKFGGYLTFGTIEPGKVSAPGQPTLKELVDLYNFGQIGPDTKVFGIIGKPVSHSKSPLIYNEAFKSVGFNGVYVPFLVDNVQNFFSTYSSADFAGFSCTIPHKEAAFQCCDEVDPVVKSIGAVNCLIKRANDGKLMGYNTDYIGAITAIENALRGANINDMEKGSPLAGKLFVVVGAGGAGKALAFGAKEKGARVVVANRTYDRARELANAIGGDAVSLAELGSFYPEDGMILANTTSIGMQPGVDETPVPKDVLKHYTLVFDAVYTPKITRLLKEAEQSGSIVVSGLEMFMGQAYEQYERFTGLPAPKELFRKVLADH*

Click here to download the sequence:
Link to NCBI Protein BLAST