Transcript Information: S_Transcript_115478.p1


Annotated TAIR IDAT2G37220.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15634980-15636331 | Reverse length=289
E-Value5.6E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1596.50107602358
Replicate 2634.95508557367
Replicate 3692.3547993197
Condition 2: 8 Hour
Replicate 11527.1814262155
Replicate 21530.5453548236
Replicate 31421.8507530827
Condition 3: 24 Hour
Replicate 1432.80587894658
Replicate 2490.38736709909
Replicate 3504.6694866921


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115478.p1 GENE.S_Transcript_115478~~S_Transcript_115478.p1 ORF type:5prime_partial len:331 (+),score=72.93,RRM_1|PF00076.18|1.1e-19,RRM_1|PF00076.18|4e-20,RRM_6|PF14259.2|7.6e-15,RRM_6|PF14259.2|1.1e-12,RRM_5|PF13893.2|6.9e-05,RRM_5|PF13893.2|7.8e-09 S_Transcript_115478:1-993(+)
GTCATATATAACCTCAGCCATTTTGTTTGCAGCAACTCCTTATTAAAACCTTATCACCCTCCCCTTTCTTCTGCTCCCCTCTCTCATTCTTCACACCAACACCACCCTTATCTCTCCCTTCTCCTCTACCCTTTCCCCTTCTTCTCTTCTTCCTTTACGATTACAATGGCCGCTACTTCCTTTTTCATTGCTTCTTTCACACCCAAAACTCTCCCCCTTTCTAAACTCCAAACCCCTTCCACCCCTTTATCTTCTTTCCCTTCTATCACCCTTTCCAGAACTGTTTCACCCAACTCTGTCTCATTTCCTCAATCGAAACGTTTTGAGCCCCTTTCCTCACGTTTCGTTAGAAACGTTGCCGTTTCATCTGAGTATGGCCAGGAAGAAGAGGTCTTGAGTGATGACGGGGGTGAGCCTGACTTCTCTCCTGACCTTAAACTCTTTGTCGGTAACTTACCTTTCAGTGTTGACAGTGCTGAGCTTGCTGGTTTATTTGGTAATGCTGGCAATGTTCAAATGGTTGAGGTTATATATGACAAAGATACTGGAAGAAGTAGAGGGTTTGGTTTTGTGACCATGTCTACTAAGGAGGAAGTAGAAGCAGCTGCTCAGCAGTTCAACGGATATGAACTAGAAGGCAGGCAATTAAGGGTGAATGCAGGCCCCCCACCACCTAGAGACTCAGCCCCTAGAATGAGCAGAGGTGGAGGACGAGGAGGAAGCTTTGAGAGCAGCAACAGGGTTCACGTTGGTAATCTGTCCTGGAAGGTTGATGATTCAGCCCTCAAGACTCTGTTTAGTGAAGTTGGAGATATATTGGATGCCAAGGTGATATATGACAGAGATAGTGGTCGGTCAAGAGGTTTTGGGTTTGTGACTTACAGTTCTGCTGAAGATGTTAACAATGCAATTGAGTCCTTGGATGGTGTGGACTTCAATGGGAGGAATATTCGAGTGAGTATGGCAGAAGCGAGACAGAGGCGTCAATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115478.p1 GENE.S_Transcript_115478~~S_Transcript_115478.p1 ORF type:5prime_partial len:331 (+),score=72.93,RRM_1|PF00076.18|1.1e-19,RRM_1|PF00076.18|4e-20,RRM_6|PF14259.2|7.6e-15,RRM_6|PF14259.2|1.1e-12,RRM_5|PF13893.2|6.9e-05,RRM_5|PF13893.2|7.8e-09 S_Transcript_115478:1-993(+)
VIYNLSHFVCSNSLLKPYHPPLSSAPLSHSSHQHHPYLSLLLYPFPFFSSSFTITMAATSFFIASFTPKTLPLSKLQTPSTPLSSFPSITLSRTVSPNSVSFPQSKRFEPLSSRFVRNVAVSSEYGQEEEVLSDDGGEPDFSPDLKLFVGNLPFSVDSAELAGLFGNAGNVQMVEVIYDKDTGRSRGFGFVTMSTKEEVEAAAQQFNGYELEGRQLRVNAGPPPPRDSAPRMSRGGGRGGSFESSNRVHVGNLSWKVDDSALKTLFSEVGDILDAKVIYDRDSGRSRGFGFVTYSSAEDVNNAIESLDGVDFNGRNIRVSMAEARQRRQF*

Click here to download the sequence:
Link to NCBI Protein BLAST