Transcript Information: S_Transcript_115480.p1


Annotated TAIR IDAT2G37220.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:15634980-15636331 | Reverse length=289
E-Value6E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0584641839366
Replicate 24.5710199359492
Replicate 31.8340842514078
Condition 2: 8 Hour
Replicate 18.6008480284569
Replicate 27.1070789877584
Replicate 33.4152463013506
Condition 3: 24 Hour
Replicate 12.2931093166922
Replicate 21.7530020003805
Replicate 32.9959887000552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115480.p1 GENE.S_Transcript_115480~~S_Transcript_115480.p1 ORF type:5prime_partial len:362 (+),score=71.48,RRM_1|PF00076.18|1.2e-19,RRM_1|PF00076.18|2.8e-17,RRM_6|PF14259.2|8.8e-15,RRM_6|PF14259.2|1.4e-10,RRM_5|PF13893.2|7.8e-05,RRM_5|PF13893.2|0.0015 S_Transcript_115480:1-1086(+)
GTCATATATAACCTCAGCCATTTTGTTTGCAGCAACTCCTTATTAAAACCTTATCACCCTCCCCTTTCTTCTGCTCCCCTCTCTCATTCTTCACACCAACACCACCCTTATCTCTCCCTTCTCCTCTACCCTTTCCCCTTCTTCTCTTCTTCCTTTACGATTACAATGGCCGCTACTTCCTTTTTCATTGCTTCTTTCACACCCAAAACTCTCCCCCTTTCTAAACTCCAAACCCCTTCCACCCCTTTATCTTCTTTCCCTTCTATCACCCTTTCCAGAACTGTTTCACCCAACTCTGTCTCATTTCCTCAATCGAAACGTTTTGAGCCCCTTTCCTCACGTTTCGTTAGAAACGTTGCCGTTTCATCTGAGTATGGCCAGGAAGAAGAGGTCTTGAGTGATGACGGGGGTGAGCCTGACTTCTCTCCTGACCTTAAACTCTTTGTCGGTAACTTACCTTTCAGTGTTGACAGTGCTGAGCTTGCTGGTTTATTTGGTAATGCTGGCAATGTTCAAATGGTTGAGGTTATATATGACAAAGATACTGGAAGAAGTAGAGGGTTTGGTTTTGTGACCATGTCTACTAAGGAGGAAGTAGAAGCAGCTGCTCAGCAGTTCAACGGATATGAACTAGAAGGCAGGCAATTAAGGGTGAATGCAGGCCCCCCACCACCTAGAGACTCAGCCCCTAGAATGAGCAGAGGTGGAGGACGAGGAGGAAGCTTTGAGAGCAGCAACAGGGTTCACGTTGGTAATCTGTCCTGGAAGGTTGATGATTCAGCCCTCAAGACTCTGTTTAGTGAAGTTGGAGATATATTGGATGCCAAGGTGATATATGACAGAGATAGTGGTCGGTCAAGAGGTTTTGGGTTTGTGACTTACAGTTCTGCTGAAGATGTTAACAATGCAATTGAGTCCTTGGATGGTGTGGTAAGCACAATTATCTTTCATGTGACATTTTGGCAGCAATGTTCTTTTTCTTTATGTGGAAAGTCTTGTGAGATTGGCTTCAATGGGTTGATTCTTAAGAAAAACCTTGGGGGCTTTTCCGGTAGTATTTTCATCCTGTGCTTACGTCTCATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115480.p1 GENE.S_Transcript_115480~~S_Transcript_115480.p1 ORF type:5prime_partial len:362 (+),score=71.48,RRM_1|PF00076.18|1.2e-19,RRM_1|PF00076.18|2.8e-17,RRM_6|PF14259.2|8.8e-15,RRM_6|PF14259.2|1.4e-10,RRM_5|PF13893.2|7.8e-05,RRM_5|PF13893.2|0.0015 S_Transcript_115480:1-1086(+)
VIYNLSHFVCSNSLLKPYHPPLSSAPLSHSSHQHHPYLSLLLYPFPFFSSSFTITMAATSFFIASFTPKTLPLSKLQTPSTPLSSFPSITLSRTVSPNSVSFPQSKRFEPLSSRFVRNVAVSSEYGQEEEVLSDDGGEPDFSPDLKLFVGNLPFSVDSAELAGLFGNAGNVQMVEVIYDKDTGRSRGFGFVTMSTKEEVEAAAQQFNGYELEGRQLRVNAGPPPPRDSAPRMSRGGGRGGSFESSNRVHVGNLSWKVDDSALKTLFSEVGDILDAKVIYDRDSGRSRGFGFVTYSSAEDVNNAIESLDGVVSTIIFHVTFWQQCSFSLCGKSCEIGFNGLILKKNLGGFSGSIFILCLRLI*

Click here to download the sequence:
Link to NCBI Protein BLAST