Transcript Information: S_Transcript_115496.p1


Annotated TAIR IDAT1G27100.1
Annotated Gene NameActin cross-linking protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9407557-9411074 | Reverse length=519
E-Value2E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2713656003378
Replicate 23.7382135130673
Replicate 33.4924782616785
Condition 2: 8 Hour
Replicate 14.2509083688637
Replicate 25.4257307332227
Replicate 35.0279906310753
Condition 3: 24 Hour
Replicate 12.830400186489
Replicate 22.4847368173404
Replicate 32.8490016936012


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115496.p1 GENE.S_Transcript_115496~~S_Transcript_115496.p1 ORF type:complete len:301 (+),score=24.46,DUF569|PF04601.9|2e-52,DUF569|PF04601.9|1.8e-28,RicinB_lectin_2|PF14200.2|0.016,RicinB_lectin_2|PF14200.2|0.086,Fascin|PF06268.9|20,Fascin|PF06268.9|1.2e+04,Fascin|PF06268.9|5.9,Fascin|PF06268.9|0.3 S_Transcript_115496:287-1189(+)
ATGGACCTTCTACTGAAGGCAGGGGCAGTGAAACTCAAGAGCCATCTAGACAAGTTCTTAGTAGCCGATGAAGACAAAGAGACAGTCCGGCAGAGTAGAAACGGGTCATCCAAACGGGCCATATGGATCATCGAACCATGCCCGAAGAACCCGGATGCAATCCGGATCAAGAACCTATTTACAGGCCTTTACTTGACAGCCTCTGACACCCCTTTTCTTCTAGGTATGACGGGTAAACGGGTCGTCCAATTGTCCATATTTGACCCGACCCGGGTAGAGTGGGAGCCTGTGAATGATGGGTTTCAAGTCAAGTTTAGGAGTAGTAAAGAGAGATCATACTTGAGGGGTAATGGTGGAACTCCGCCTTGGAGGAATTCAATCACTCATGATGTGCCCCTCACTGGTGGTACTTATAATTGGGTCCTTTGGGATGTTGAACCCGTTTCATTGCCGGATCTTGGGTCGTTTTCGGATTGTCCGTCGCCTATGACGAGCTTTAATTCGATCCTATCCGATGATTTTAACGGGTACGGGTCGTATCCGGGTACTCCAGTGTCAACAAGATCAACTTCTTCTCCTTGGTCTCCAGAATTGGCTCGTAGGAAGTCAGGCATGGATTTGTTCAGAAACGCCAAGACAATCAGGCTAAAGAGCCACCATGACAAGTACTTAGCAGCTGAAGATGATGAAGAATCCGTGACCCAAGAAAGAAACGGGTCATCCAAGAATGTCAAATGGGTCGTTGACTTTGTTGACGATGGTACCGCAATTCGGTTAAAGAGTTGCTATGGAAAGTACTTGACTGCTTCTAATCATCCGTTTTTGTTTTTTTTTGGTTTTGGCAGGAGGGAACTCCCTATGATCCACTGGATCATAGGTACAAACCCACTTGGGCGTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115496.p1 GENE.S_Transcript_115496~~S_Transcript_115496.p1 ORF type:complete len:301 (+),score=24.46,DUF569|PF04601.9|2e-52,DUF569|PF04601.9|1.8e-28,RicinB_lectin_2|PF14200.2|0.016,RicinB_lectin_2|PF14200.2|0.086,Fascin|PF06268.9|20,Fascin|PF06268.9|1.2e+04,Fascin|PF06268.9|5.9,Fascin|PF06268.9|0.3 S_Transcript_115496:287-1189(+)
MDLLLKAGAVKLKSHLDKFLVADEDKETVRQSRNGSSKRAIWIIEPCPKNPDAIRIKNLFTGLYLTASDTPFLLGMTGKRVVQLSIFDPTRVEWEPVNDGFQVKFRSSKERSYLRGNGGTPPWRNSITHDVPLTGGTYNWVLWDVEPVSLPDLGSFSDCPSPMTSFNSILSDDFNGYGSYPGTPVSTRSTSSPWSPELARRKSGMDLFRNAKTIRLKSHHDKYLAAEDDEESVTQERNGSSKNVKWVVDFVDDGTAIRLKSCYGKYLTASNHPFLFFFGFGRRELPMIHWIIGTNPLGRG*

Click here to download the sequence:
Link to NCBI Protein BLAST