Transcript Information: S_Transcript_11551.p1


Annotated TAIR IDAT3G12280.1
Annotated Gene Nameretinoblastoma-related 1
Annotated Gene Symbol(s)RBR1, RBR, RB, ATRBR1, RB1
Annotation TypeOrtholog
Chromosome Positionchr3:3913671-3918433 | Reverse length=1013
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6532503087951
Replicate 25.84271502116
Replicate 35.4125421114915
Condition 2: 8 Hour
Replicate 18.007557628963
Replicate 29.4395053054973
Replicate 38.7833087463214
Condition 3: 24 Hour
Replicate 15.2237764868812
Replicate 25.6883479648145
Replicate 36.6295096954159


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11551.p1 GENE.S_Transcript_11551~~S_Transcript_11551.p1 ORF type:complete len:1012 (+),score=190.18,RB_A|PF01858.13|6.6e+03,RB_A|PF01858.13|9.3e-60,RB_B|PF01857.16|9.8e-43,DUF3452|PF11934.4|1.5e-35,DUF3452|PF11934.4|2.7e+03,Rb_C|PF08934.6|3.6e+02,Rb_C|PF08934.6|7.9e-05 S_Transcript_11551:160-3195(+)
ATGGAAGACTTGAAGCCTGCAAATTCGATCAAGGAGAATGACAGCGAAATTGAAGCTCGTTTCAATGATCTCTGCAAGAACCAATTTTGTTTGGATGAAAGGATACTATCAGACGCCATAAAACTCTTTATGGAGAGAAGAAGTATCTTGTCAACGAATATTTTAGCTATAGGGAGCATGAAGCTTGAAGAATTGGAAAGATATTTGTTTGCATTTGTTCTCTACTCTGTTAAGAGACTGGGTGAGAGGAATAAAGGTGATGCGAGTGAAGGGGCGAAAGAAAATGGAGTTACTTTGTGTCAGATTTTGAGAGCTTTGAAGTTGAACCTTGTGGACTTCTTCAAAGAGCTTCCTCAGTTTGTTGTCAAGATTGGCCCAACTTTAAGTAACATGTATGGTATTGATTGGGAGAAGAGGCTGGAGGTGAAGGAGTTGGAGGCTGATTTCGTTCACTTGAATCTTCTAAGCAAGTACTACAAGCGGGCATTCCAAGAATTTTTCAAGACAAATGAAGCTGATATGCAACCATCTGATGCAAAGACTTCCCGTTTTGGTTACATTTCAGATTACCACAAATTTGGCTGGTTGCTATTTTTGGCACTTCGTGTTCATGCATTCGGCAGGTTTAGGGACCTAGTCACCTGCACTAATGGCTTAGTCTCTGTGTTGGCTATCTTGATCATCCACATTCCAGTTCGTTTAAGGAAGTTCAATTTTCTTGATTCACCTCTTTTTGAGAAGAAAACAGAAAGAGGTATCAACCTGATTGCTTCACTTTGCCGCAAATATGACACGTCTGAAGATGATGTGAAGAAAATGATGGAGAAAGCTAACGATCTAATTGTGTCTATTTTGGAGAAAAGTCTGCACTCAGCTTCAGAATGCAGAGCTGAAAAACTTGAAAACATTGATCCAGAGGGTTTGAGTTATTTTGAAAATCTGTTGGAAGACTCATCACTTCCATCTAATATAAGCAAGCTAGAAAAAGATTATGATGCTGCAGTTTGGAACAAGGATGATATAGATGAAAGAGTGTTTGTAAATGACAACGATAGCTTACTAGGTTCAGGGAGTCTCTCTGGAGGTGCTGTGAATATAAGTGGTACTAAGAGAAAGCTTGATGCCATGGCCTCACCAACAAAAACAATTACTAGTCCTTTGTCCCCGGCTAGATCTCCTGCATCACACACAAATGGGGTTCGTGGCAGTGTCAGCAGTAAAATAGCAGCCACACCTGTAAGCACTGCCATGACAACTGCTAAGTGGCTGCGTACTGTAGTTTCCCCACTTCCATCTAAACCATCACTACAGCTGGAGAAGTACTTCACGGCATGTGATAGGGATGTAAGTAGTGAGATTGTGCGCAGGGCTCATATAATTTTGGAGGCCATTTTTCCTAATAGTGCTCTTGGAGAGAGATGTGTTGCTGGGAACTTGCCAAATGCTAACCTGATGGACAACATATGGGCACAACAAAGAAGGCTGGAAGCTCTGAAGCTATACTACAGGGTCTTGGAGGCAATGTGCATGGCAGAAGATCAGTTGCTGCATGCAAATAATCTAACTTCTTTGCTAACCAATGAAAGATTCCACCGATGTATGCTTGCTTGCTCTGCTGAACTAGTCTTGGCCACTCATAAGACGGTGACAATGTTGTTTCCTGCTGTTCTAGAAAAAACAGGAATTACAGCTTTTGATCTTAGCAAGGTAATAGAAAGTTTCATACGACATGAAGATTCTCTACCAAGAGAGTTGAGAAGGCATTTAAATTCCTTGGAAGAGAGACTCTTGGAGAGCATGGTTTGGGAAAAGGGCTCGTCAATGTACAATTCATTGATAATTGCAAGAGCAGCCCTGGCTGCAGAGATAAATTGTCTGGTATTGTTAGCGGAGCCAATGCCATCTCTAGATTCAATTGCTGGACATGTTGATATTCCCTCTGGAGGCTTACGACCTTTGCCATCTTTAGAGAAGCATAATACTGCGGCAGGGAAAACTAGTGATGTCAGGTCCCCAAAGAGAATTTCTGCAGATAATCGAAGCGTGCTTGTAGAACGCAACTGTTTTACATCACCAGTGAAGGATCAGGTGGTAAACAATCTGAAGCAAAAACTAACCCCTCCTGCATTGCAGTCTGCATTTGCAAGTCCAACAAGGCTAAGTATAGGGGGCAGAGGGGAAACCTGTGCTGAGACAGGGATTACTATATTTTTCCGTAAGACTATGAAGCTAGCTGCTGTCCGAATTAACGGCATGGTTGAAAGGCTTCAACTACATCAACATTCGAGGGAGAGTGTGTATTGTCTTTTCCACAAAATTCTGAATCAACAGACACAACTTTTCTTCAATCGGCACATTGACCAAATAATTCTCTGTTGTTTCTATGGAGTTGCGAAGGTTTCTCAACTAAACCTCACATTCAAGGAGATTATTTTGAACTATCGTAAGCAACCTCAATGCAAACCACAAGTATTTCGCAGTGTATTTGTTGACTGGTCCTCAGCACGCAGGAATGGAAGACAGGGACAGGATCATGTTGACATTATCACATTTTACAACGAGATATTTATTCCTTCTGTAAAGCCTCTTCTAGTGGAGATTGGTGCTGGAGTAACAAGCGTGAGAAACAACCCAACACCTGAGGCTAACAATGACAATGATGCTCCATGCCCGGGATCTCCGAAAGTATCTACTTTCCCAAGTCTGCCTGATATGTCACCAAAGAAGGTTTCTGCTGTGCACAACGTTTATGTCTCTCCCTTGCGATCATCCAAGATGGACGCTCTAATCTCTCATAGTTCCAAGAGTTACTACGCTTGTGTTGGGGAAAGCACTCATGCATATCAAAGCCCTTCGAAGGATCTGACGGCCATTAATGACCGCTTGAATAGTGGTAATCGTAAGGTAAGGGGAGCACTGAATTTTGATGAACCCGGTGCTGGATTGGTAAGTGATTCTCTTGTTGCCAACAGCCTGTACCCTCAGAATGGAAGTTGTTCCAGTCCAGTGGTGAAAACGGAGCAGCCGGACTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11551.p1 GENE.S_Transcript_11551~~S_Transcript_11551.p1 ORF type:complete len:1012 (+),score=190.18,RB_A|PF01858.13|6.6e+03,RB_A|PF01858.13|9.3e-60,RB_B|PF01857.16|9.8e-43,DUF3452|PF11934.4|1.5e-35,DUF3452|PF11934.4|2.7e+03,Rb_C|PF08934.6|3.6e+02,Rb_C|PF08934.6|7.9e-05 S_Transcript_11551:160-3195(+)
MEDLKPANSIKENDSEIEARFNDLCKNQFCLDERILSDAIKLFMERRSILSTNILAIGSMKLEELERYLFAFVLYSVKRLGERNKGDASEGAKENGVTLCQILRALKLNLVDFFKELPQFVVKIGPTLSNMYGIDWEKRLEVKELEADFVHLNLLSKYYKRAFQEFFKTNEADMQPSDAKTSRFGYISDYHKFGWLLFLALRVHAFGRFRDLVTCTNGLVSVLAILIIHIPVRLRKFNFLDSPLFEKKTERGINLIASLCRKYDTSEDDVKKMMEKANDLIVSILEKSLHSASECRAEKLENIDPEGLSYFENLLEDSSLPSNISKLEKDYDAAVWNKDDIDERVFVNDNDSLLGSGSLSGGAVNISGTKRKLDAMASPTKTITSPLSPARSPASHTNGVRGSVSSKIAATPVSTAMTTAKWLRTVVSPLPSKPSLQLEKYFTACDRDVSSEIVRRAHIILEAIFPNSALGERCVAGNLPNANLMDNIWAQQRRLEALKLYYRVLEAMCMAEDQLLHANNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLEKTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIIARAALAAEINCLVLLAEPMPSLDSIAGHVDIPSGGLRPLPSLEKHNTAAGKTSDVRSPKRISADNRSVLVERNCFTSPVKDQVVNNLKQKLTPPALQSAFASPTRLSIGGRGETCAETGITIFFRKTMKLAAVRINGMVERLQLHQHSRESVYCLFHKILNQQTQLFFNRHIDQIILCCFYGVAKVSQLNLTFKEIILNYRKQPQCKPQVFRSVFVDWSSARRNGRQGQDHVDIITFYNEIFIPSVKPLLVEIGAGVTSVRNNPTPEANNDNDAPCPGSPKVSTFPSLPDMSPKKVSAVHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINDRLNSGNRKVRGALNFDEPGAGLVSDSLVANSLYPQNGSCSSPVVKTEQPDS*

Click here to download the sequence:
Link to NCBI Protein BLAST