Transcript Information: S_Transcript_11554.p1


Annotated TAIR IDAT3G12280.1
Annotated Gene Nameretinoblastoma-related 1
Annotated Gene Symbol(s)RBR1, RBR, RB, ATRBR1, RB1
Annotation TypeOrtholog
Chromosome Positionchr3:3913671-3918433 | Reverse length=1013
E-Value4.1E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6071886607478
Replicate 22.7323602594334
Replicate 33.2044680071321
Condition 2: 8 Hour
Replicate 13.6264989079043
Replicate 24.0112187025018
Replicate 33.8612810818635
Condition 3: 24 Hour
Replicate 12.1400717652523
Replicate 22.681116341749
Replicate 33.6364500251369


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11554.p1 GENE.S_Transcript_11554~~S_Transcript_11554.p1 ORF type:3prime_partial len:541 (+),score=106.52,RB_A|PF01858.13|1.2e-59,RB_B|PF01857.16|5.5e-20 S_Transcript_11554:25-1620(+)
ATGGAGAAAGCTAACGATCTAATTGTGTCTATTTTGGAGAAAAGTCTGCACTCAGCTTCAGAATGCAGAGCTGAAAAACTTGAAAACATTGATCCAGAGGGTTTGAGTTATTTTGAAAATCTGTTGGAAGACTCATCACTTCCATCTAATATAAGCAAGCTAGAAAAAGATTATGATGCTGCAGTTTGGAACAAGGATGATATAGATGAAAGAGTGTTTGTAAATGACAACGATAGCTTACTAGGTTCAGGGAGTCTCTCTGGAGGTGCTGTGAATATAAGTGGTACTAAGAGAAAGCTTGATGCCATGGCCTCACCAACAAAAACAATTACTAGTCCTTTGTCCCCGGCTAGATCTCCTGCATCACACACAAATGGGGTTCGTGGCAGTGTCAGCAGTAAAATAGCAGCCACACCTGTAAGCACTGCCATGACAACTGCTAAGTGGCTGCGTACTGTAGTTTCCCCACTTCCATCTAAACCATCACTACAGCTGGAGAAGTACTTCACGGCATGTGATAGGGATGTAAGTAGTGAGATTGTGCGCAGGGCTCATATAATTTTGGAGGCCATTTTTCCTAATAGTGCTCTTGGAGAGAGATGTGTTGCTGGGAACTTGCCAAATGCTAACCTGATGGACAACATATGGGCGCAACAAAGAAGGCTGGAAGCTCTAAAGCTATATTACAGGGTCCTGGAGGCAATGTGCATTGCAGAGGCTCAGTTGTTGTGTGCAAATAATCTGACATCTTTGCTAACCAATGAAAGATTCCACAGGTGTATGCTTGCTTGCTCTGCAGAACTAGTTTTGGCCACTCATAAGACAGTGACAATGTTGTTCCCAGCTGTCTTAGAGAAAACAGGAATTACAGCATTTGATCTTAGTAAGGTAATCGAAAGTTTCATACGACATGAGGATTCTCTTCCTAGAGAGCTGAGAAGGCATTTGAATTCCTTGGAAGAGAGACTCTTGGAGAGCATGGTTTGGGAAAAGGGCTCATCTATGTATAACTCTTTGATAATTGCAAGACCAGCCCTGTCTGCAGAGATAAACCGCCATGGATTACTGGCAGAGCCTATGCCATCTTTAGATTCAATTGCTGTGCACAGTAATGTTCCCTCTGGAGGGTTACCACCATTGCCATGTTCACAGAAGCATGATATTGTAACAGGGCAAAATGGCGATATCAGGTCCCCAAAGAGAATTTCCACAGAGAATCGAAGCGCACTCGTAGAGCGCAACTCTTTCACATCACCAGTGAAGGATCGCTTGATAAATAATCTGAAGCAAAAGCTAACCCCTCCAGCATTGCAGTCTGCATTTGCAAGTCCAACAAGACTGAGCCCAGGGGGTGGAGGTGAAACATGTGCAGAAACAGGCATCAATATATTCTTCAGCAAGATTGTGAAGTTAGCAGCTGTCAGAATTAACGGCATGGTTGAAAGGCTTCAACTACATCAACATTCGAGGGAGAGTGTGTATTGTCTTTTCCAGAAAATTCTGAATCAACGGACACCACTGTTTTTTAATCGGCACATTGACCAACTAATTCTCTGTTCTTTCTACGGAGTTGCAAAGATATCTCAATTAAACCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11554.p1 GENE.S_Transcript_11554~~S_Transcript_11554.p1 ORF type:3prime_partial len:541 (+),score=106.52,RB_A|PF01858.13|1.2e-59,RB_B|PF01857.16|5.5e-20 S_Transcript_11554:25-1620(+)
MEKANDLIVSILEKSLHSASECRAEKLENIDPEGLSYFENLLEDSSLPSNISKLEKDYDAAVWNKDDIDERVFVNDNDSLLGSGSLSGGAVNISGTKRKLDAMASPTKTITSPLSPARSPASHTNGVRGSVSSKIAATPVSTAMTTAKWLRTVVSPLPSKPSLQLEKYFTACDRDVSSEIVRRAHIILEAIFPNSALGERCVAGNLPNANLMDNIWAQQRRLEALKLYYRVLEAMCIAEAQLLCANNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLEKTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIIARPALSAEINRHGLLAEPMPSLDSIAVHSNVPSGGLPPLPCSQKHDIVTGQNGDIRSPKRISTENRSALVERNSFTSPVKDRLINNLKQKLTPPALQSAFASPTRLSPGGGGETCAETGINIFFSKIVKLAAVRINGMVERLQLHQHSRESVYCLFQKILNQRTPLFFNRHIDQLILCSFYGVAKISQLNL

Click here to download the sequence:
Link to NCBI Protein BLAST