Transcript Information: S_Transcript_115596.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2811143915869
Replicate 21.4708526371677
Replicate 32.9859667944877
Condition 2: 8 Hour
Replicate 13.2495832864203
Replicate 24.9005001782258
Replicate 34.4661775934247
Condition 3: 24 Hour
Replicate 14.3689766981188
Replicate 23.021841543513
Replicate 30.72062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115596.p1 GENE.S_Transcript_115596~~S_Transcript_115596.p1 ORF type:3prime_partial len:105 (+),score=29.77 S_Transcript_115596:24-335(+)
ATGGAAGCACCTGCATCAAGTAGAATGCTTGACGATGAAGACAAGGCCTTGAAGAGCCTGCTTGACTCATTTGGTTCTGTGTTCTCTCTTCAAGACATAGCTTCTGCTTTTTGCAAGGCAGGACGAGATGCTAGCCTCGCTGGTGAGCTTCTTTGTGGAAAGAGAACACACTCACTTGGTGGCTCCTTTGAGATATCTAATGGTTTTGTAAACGGTGAAACTTCTTTGAAGTATGATAATGGATTTGGTAAGTCAGGCTACCCAAATGGAAATAGTGACTGTAAAGCAGTAAGATTGAAAAGGAATCCTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115596.p1 GENE.S_Transcript_115596~~S_Transcript_115596.p1 ORF type:3prime_partial len:105 (+),score=29.77 S_Transcript_115596:24-335(+)
MEAPASSRMLDDEDKALKSLLDSFGSVFSLQDIASAFCKAGRDASLAGELLCGKRTHSLGGSFEISNGFVNGETSLKYDNGFGKSGYPNGNSDCKAVRLKRNPV

Click here to download the sequence:
Link to NCBI Protein BLAST