Transcript Information: S_Transcript_115663.p1


Annotated TAIR IDAT5G26040.2
Annotated Gene Namehistone deacetylase 2
Annotated Gene Symbol(s)HDA2
Annotation TypeOrtholog
Chromosome Positionchr5:9099321-9101598 | Reverse length=387
E-Value8.8E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6322971433249
Replicate 23.7649811531595
Replicate 33.7137250134213
Condition 2: 8 Hour
Replicate 111.354132728576
Replicate 212.598481315887
Replicate 39.0210413072276
Condition 3: 24 Hour
Replicate 14.7715786464097
Replicate 25.4919133853948
Replicate 34.9927596433336


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115663.p1 GENE.S_Transcript_115663~~S_Transcript_115663.p1 ORF type:5prime_partial len:293 (-),score=66.92,Hist_deacetyl|PF00850.15|1.8e-46 S_Transcript_115663:31-909(-)
GAGGGTGTATTGGACAAAAAGCGTATTGTTGAGCCTAAGGAAGCTTCAAGAGATGATCTGTTAGTGGTGCATCTAGAGAAATACTTGGATAGTCTGAAAAACAGTTTGACCGTGGCCACTATTGTGGAGGTGCCACCAGTTGCAATGTTGCCCAATTGCATCGTACAGCAAAAAGTTCTTTACCCTTTCAGAAAGCAGGTTGGGGGATCTATTCTAGCTGCAAAGCTTGCGAAGGAGCGAGGATGGGCAATCAATGTTGGTGGAGGTTTCCATCATTGTTCTGCTTATAAGGGAGGTGGTTTTTGTGCTTATGCTGACATCTCCCTGTGCATTCACTTTGCCTTTATTCGTTTAAATATTTCCAGGGTTATGATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAACAGATTTTGCTGGAGAAAGAAGAGTTTACATTCTTGATATGTACAACCCTAACATATATCCATGTGACTATACAGCAAGGAGGTACATTGATCAGAAGGTTGAAGTTGAGAGTGGAACATCAACAAATGAGTACTTGCAGAAGTTAGATGATGCACTTGAGTTTGCACGGCATATGTTTCATCCTGAGTTGGTGGTGTACAATGCTGGTACGGACATTCTGGATGGCGATCCGCTTGGTAGGCTGAGGGTTAGTCCTGATGGTATAATTAAGAGAGATGAGAAGGTTTTCGCATTTGCTCGCGAGAAGAACATTCCTCTTCTGATGCTTACATCAGGTGGCTATATGAAGACGAGTGCTAGAGTGATCGCTGATTCGATCACTAATCTGGTAAAGAAACAGTTGATAGATTTGACAGGCTTGGAAAATACTGCAGCAACAGGGAATTCGAGATGCAATGCCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115663.p1 GENE.S_Transcript_115663~~S_Transcript_115663.p1 ORF type:5prime_partial len:293 (-),score=66.92,Hist_deacetyl|PF00850.15|1.8e-46 S_Transcript_115663:31-909(-)
EGVLDKKRIVEPKEASRDDLLVVHLEKYLDSLKNSLTVATIVEVPPVAMLPNCIVQQKVLYPFRKQVGGSILAAKLAKERGWAINVGGGFHHCSAYKGGGFCAYADISLCIHFAFIRLNISRVMIIDLDAHQGNGHETDFAGERRVYILDMYNPNIYPCDYTARRYIDQKVEVESGTSTNEYLQKLDDALEFARHMFHPELVVYNAGTDILDGDPLGRLRVSPDGIIKRDEKVFAFAREKNIPLLMLTSGGYMKTSARVIADSITNLVKKQLIDLTGLENTAATGNSRCNAL*

Click here to download the sequence:
Link to NCBI Protein BLAST