Transcript Information: S_Transcript_115772.p1


Annotated TAIR IDAT5G64920.1
Annotated Gene NameCOP1-interacting protein 8
Annotated Gene Symbol(s)CIP8
Annotation TypeHomolog
Chromosome Positionchr5:25944338-25945342 | Reverse length=334
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6623396195203
Replicate 27.6916147081244
Replicate 35.7527800627745
Condition 2: 8 Hour
Replicate 17.4345397435877
Replicate 26.1573895338697
Replicate 34.6933976377941
Condition 3: 24 Hour
Replicate 18.6177063311518
Replicate 29.3566194581251
Replicate 37.6360317923746


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115772.p1 GENE.S_Transcript_115772~~S_Transcript_115772.p1 ORF type:5prime_partial len:109 (-),score=2.37,zf-RING_2|PF13639.2|1.5e+04,zf-RING_2|PF13639.2|1.9e-11,zf-RING_11|PF17123.1|1e-05 S_Transcript_115772:38-364(-)
ACCACCATCACCATGTCCATGATCTCAAGCTCTCAAGTAGACGTACGATCAATATTTGATCTTGATGAAGCACTTGATTGCTGTACTTATACTGACATGACCATCAAAACGACGTCGTCAAATAACAAGGTTTTGTTCGATGATATTCCAACTGTAAGTGTTGGGTCTGATTCGGTGTGCTGCGTCTGCATGGAAGGCTTCTCATCGTCGCATCACAACAACGTCGGTAAACAGCTCCCTTGCGGACACGTGTACCATCCTGATTGTATCCTCACCTGGATTTCCTCTTGTAATAGTTCCTGCCCTCTTTGTCGCCTTGTCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115772.p1 GENE.S_Transcript_115772~~S_Transcript_115772.p1 ORF type:5prime_partial len:109 (-),score=2.37,zf-RING_2|PF13639.2|1.5e+04,zf-RING_2|PF13639.2|1.9e-11,zf-RING_11|PF17123.1|1e-05 S_Transcript_115772:38-364(-)
TTITMSMISSSQVDVRSIFDLDEALDCCTYTDMTIKTTSSNNKVLFDDIPTVSVGSDSVCCVCMEGFSSSHHNNVGKQLPCGHVYHPDCILTWISSCNSSCPLCRLVI*

Click here to download the sequence:
Link to NCBI Protein BLAST